Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	51598	1500664	225	-0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	1617778	1662463	16	-0.9681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	1677447	16021930	8166	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	16022502	16026512	7	-1.8885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	16026788	16724101	304	-0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	16741950	17134384	164	0.4429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	17134475	25455928	5269	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	25465715	25535931	33	0.592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	25545741	40793623	8171	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	40794663	40800797	4	-1.1103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	40801513	72541086	20582	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	72541504	72583736	46	-1.2694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	72584492	75823432	1931	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	75827351	75827442	2	-2.6865
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	75832097	105935768	19200	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	105937167	105938436	6	-1.9509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	105940986	108530807	1845	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	108531282	108539019	4	-1.1689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	108540627	110029038	724	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	110034497	110044476	18	1.304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	110046521	112491849	1955	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	112497488	112498764	23	-0.4897
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	112498899	147303148	6381	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	147306690	147523315	131	-0.6184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	147526040	150822391	1527	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	150822419	150852862	29	1.4718
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	150852902	157133197	3831	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	157135125	157136383	2	-1.5449
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	157141442	159775499	1650	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	159780383	159903499	39	-0.5728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	159903515	176077929	11563	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	176077978	176078122	3	-1.0948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	176078640	185982477	6684	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	185984183	185987992	2	-1.8716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	185991233	191422415	3571	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	191422902	191422955	3	-1.1619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	191422971	192714857	947	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	192718034	192721641	2	-1.5562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	192723639	194998709	1458	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	195005246	195050249	44	-0.5111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	195055609	195065266	24	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	195065287	195082414	24	-0.4715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	195083353	208137685	8817	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	208148236	208150607	3	1.1065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	208153175	211071078	1950	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	211071635	211077059	7	-1.1652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	211081076	225491924	9726	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	225492695	225493029	3	-1.2248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	225495801	247191011	15443	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	2784	3706436	2568	-0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	3710421	3711148	4	-0.9314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	3714413	4194327	419	-0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	4194344	4200307	26	0.3639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	4200359	13001528	6912	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	13006002	13010482	8	-0.7826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	13010989	14621145	1103	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	14622400	14627543	12	-1.0881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	14627815	18833953	3171	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	18834449	18842057	6	-0.7385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	18844265	34538784	9872	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	34544573	34591060	48	0.5162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	34591536	35942146	975	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	35942976	35943433	2	-1.2262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	35945333	40844166	3670	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	40844256	40844942	2	-1.6747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	40845310	52595241	8391	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	52597429	52641453	42	0.456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	52643644	53163930	429	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53166535	53191865	21	0.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53192114	75296152	14071	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	75297098	75358721	35	-1.2061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	75365656	89904426	8483	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	89906310	91465049	100	0.2624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	91469065	106241081	6527	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	106241154	106251789	13	0.4672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	106253687	127568491	12417	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	127573516	127574233	2	-2.3132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	127574416	145327217	10790	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145328743	145332391	5	-1.1902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145333622	146578555	734	-0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	146580874	146583404	24	-1.892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	146594276	164345098	10593	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	164351734	164353372	5	-1.1225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	164354888	184282192	12557	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184285438	184285569	3	-3.0673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184289140	184303643	26	-0.0758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184303984	184304012	2	-1.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184304215	204109563	11122	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204118925	204133843	6	-0.9932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204135006	212889567	5719	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	212894794	212900070	25	-0.9038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	212900371	229465250	10825	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	229467723	229473134	14	-0.6429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	229473627	240604553	7190	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	240605583	240612611	6	-0.8233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	240614358	242738129	1036	-0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	35345	26423930	19950	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26426277	26430288	3	-1.2439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26430765	26588205	121	0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26589978	26589989	8	0.69
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26590953	28715093	1366	-0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	28716061	28716343	4	-0.9625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	28720095	46024712	11313	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	46024840	46026717	2	-1.8358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	46026747	100427166	31053	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	100427201	100431998	34	-0.4536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	100432004	113756561	8094	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	113757303	113760927	2	-2.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	113761506	131243312	10646	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	131243814	131288926	54	0.6122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	131289614	144768455	8371	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	144768490	144768664	4	1.2879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	144769491	163995786	11910	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	163995843	164011324	10	0.7674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	164013009	164023184	9	-0.8614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	164028410	164108689	48	0.5475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	164109266	196766953	20694	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	196767187	196959467	46	0.6236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	196959853	199380515	1174	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	2281	11366	9	0.0601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	11426	56719	49	0.4387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	58821	9819488	5748	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	9823258	9832514	2	1.4495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	9832726	9839910	22	0.2881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	9840001	9999813	183	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10001452	10009766	16	-0.424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10011816	34455399	16801	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	34455420	34455435	2	-1.804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	34455449	34501120	39	0.5818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	34506267	64376535	16584	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	64380064	64390853	29	-0.3164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	64399026	68943146	2859	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	68943659	69168574	83	-0.3719
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	69171930	70424305	497	0.0533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	70424450	70425368	2	-2.2163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	70426477	71192298	487	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71196206	71316155	102	-1.1515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71322241	76521047	2952	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	76521689	76558816	19	-0.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	76559018	115393149	23667	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	115394772	115403701	25	-1.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	115403715	162093450	28023	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	162099468	162104408	23	-0.6404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	162104417	165870178	2472	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	165870199	165878093	6	-0.77
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	165880601	173665046	4851	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	173665163	173665218	2	1.6088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	173677707	181393150	4914	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181393553	181395374	3	-1.5488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181397539	181846880	385	-0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181850745	181851222	2	-2.3364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181851362	191261904	6583	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	68532	2091142	1060	-0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	2097129	2116679	19	-1.0786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	2122531	12868780	9138	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	12868865	12879650	10	0.9528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	12886857	15771492	1980	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	15772222	15773597	11	-0.954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	15776346	17645906	1199	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	17646566	17729189	42	0.268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	17730102	29457026	6987	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29461586	29463769	2	-1.7651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29465948	33849751	3043	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33849930	33850245	2	-1.9335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33850462	57357403	12396	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57361784	57369290	32	2.4292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57374114	57644041	220	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57644413	57644783	2	-0.8409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57647474	58339315	520	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	58339383	58340462	5	-0.7783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	58340487	68882059	6556	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	68903050	69153891	5	1.2657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	69269183	152551736	51057	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	152552163	152563019	7	-0.8367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	152563042	180307129	18623	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	180311316	180350517	18	0.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	180350709	180722926	172	-0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	94661	199283	101	0.0588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	202353	274869	38	-0.3643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	275704	19148098	14650	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	19150160	19152848	8	-0.7399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	19152877	29945051	6936	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29945166	29957246	16	0.7563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29958175	29982787	8	-0.1202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29984938	30006876	8	-1.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	30007656	31388802	656	-0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	31394255	31404430	11	1.0687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	31417903	32689867	551	-0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32690181	32709295	9	-0.956
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32710085	32732569	9	0.1433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32733073	32734596	4	1.3389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32758590	54039110	13741	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	54039189	54039814	6	1.0314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	54043307	67832215	6141	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	67834987	67835248	3	-1.1392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	67842385	74648586	4377	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	74648953	74658138	10	0.8476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	74660283	77493251	1769	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	77496587	77509408	20	-0.6763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	77509476	79028500	985	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	79028521	79098352	109	0.344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	79098438	103844669	15487	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	103844732	103868754	45	-1.3693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	103872163	116747652	7987	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	116748334	116749773	2	-1.2075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	116750794	134307961	11092	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	134310764	134311325	2	-2.2832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	134313765	170892930	25149	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	52911	24323848	17524	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24323886	24323914	2	-2.1329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24324100	38264360	9911	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	38264847	38348496	113	-0.2732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	38351366	54347867	11016	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	54353999	54354011	6	-1.4635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	54360982	97233445	22155	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	97239868	97240411	8	-0.7492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	97242176	125832210	16699	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	125832718	125833851	12	-1.3777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	125834112	133429192	4707	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	133435717	133446174	26	0.5931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	133446205	134787145	1014	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	134787259	134793622	6	-1.1029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	134797965	141399622	4173	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	141399969	141461564	67	0.3223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	141462465	142156294	438	-0.0577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	142156339	142165914	28	0.6222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	142176424	143163911	559	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143163931	143178205	10	-0.5613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143198992	143535212	271	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143540168	143658509	34	-0.3928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143664784	152204868	5116	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	152209796	152210920	2	-2.3346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	152217456	158819765	4583	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	21254	5581675	6093	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	5586134	5591903	27	-0.8656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	5594496	6976336	1690	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	6982527	7237790	45	0.2533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	7241701	7847301	149	-0.4569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	7847316	10168106	1894	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	10168651	10168869	2	-1.399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	10169020	11986960	1398	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12025135	12038532	6	-0.8802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12071716	12291857	49	0.0437
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12305298	12313350	9	-0.8397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12314083	39349482	19538	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39349816	39506122	60	0.8726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39507456	39949857	268	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39950114	39950804	3	-0.7873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39953976	40301274	317	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	40302954	40308624	31	-0.9703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	40308639	71089927	16557	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	71090312	71091579	3	-1.5467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	71093937	92944191	12918	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	92944364	92944640	3	-1.0546
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	92947224	104061766	6944	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	104064087	104066611	3	-1.4541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	104067722	112360670	4989	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	112363455	112364436	10	-1.2053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	112369457	129811457	11657	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	129813075	129833267	11	-0.7176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	129846636	146268959	11259	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	36587	592903	511	0.0351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	596699	596961	4	-1.9331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	597307	44386132	30949	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	44409324	44748482	30	0.8045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	44760537	74177397	3470	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74179392	74179463	2	-1.3915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74182086	89712414	11161	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	89743971	89744039	2	-1.594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	89747777	92647704	2033	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	92649184	92649594	4	-0.8879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	92649953	93441971	650	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	93442027	93443366	17	-0.7891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	93443531	140211215	31069	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	62759	41843467	29191	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	41845130	42102890	29	0.4707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	42103500	45613625	2343	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	45632493	45931287	5	1.072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	45947683	55222202	4947	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55228908	55251669	23	-1.0009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55254804	66979013	8207	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	66979016	66984436	13	-0.5585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	66984452	70952478	2551	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	70952492	70961620	5	-0.7122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	70962209	75348830	2748	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75356239	75515949	82	0.5408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75517917	91579028	10998	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91579261	91583196	6	-1.3323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91584482	135356694	29918	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	188510	1610144	495	-0.036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	1611141	1611337	2	-1.7341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	1613703	4194982	1292	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	4195630	4303385	30	0.6048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	4309557	5740499	1485	-0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	5743981	5766037	35	-0.4803
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	5768936	48554998	30091	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	48558010	48559252	2	-2.0515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	48562894	55133087	1235	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	55133210	55196566	37	0.4066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	55198894	134449982	52427	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	20703	2106150	1266	-0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	2116123	2128181	40	-0.6563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	2128284	11110690	5964	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	11111991	11132799	12	1.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	11143141	89007481	48532	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	89015800	89016205	7	-1.2716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	89017688	97474621	5949	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	97480376	97482119	2	-1.5832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	97486213	130686668	22713	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	130698537	130710149	28	0.4333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	130718685	132288262	556	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	17924949	22527210	2899	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	22530678	22531515	12	-0.6488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	22536195	23927373	1135	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	23927388	23937598	14	-0.4246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	23937678	36969135	9506	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	36970036	36982757	16	0.7044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	36986330	54097658	11236	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	54097918	54098004	2	-1.4034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	54098148	114126499	39470	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	18072124	18492533	29	-0.0699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	18502799	19492423	160	0.6077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	19493212	21466983	1378	-0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	21467855	22038772	481	-0.3494
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	22038836	105939331	53249	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	105939599	105989153	54	-0.6673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	105989694	106356482	224	0.044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	18276341	18529787	57	0.0678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	18544080	18846002	49	0.3653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	18846104	18846971	11	1.0636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	18850041	19103576	42	0.4099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	19107947	32510868	7660	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	32514464	32605609	63	-0.7361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	32617545	51572180	11647	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	51572283	51572571	6	-1.8063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	51577539	63601155	8259	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	63603995	63605440	3	-2.3169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	63609587	74665417	6546	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	74678296	74682830	22	0.9776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	74689234	80840216	3660	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	80843133	80905894	7	-0.9745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	80966604	82331721	764	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	82331742	82334554	6	-0.9799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	82338281	90566759	5799	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	90566878	90567298	3	1.4439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	90567762	100286563	7442	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	777	32496123	20156	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	32496402	32496410	5	-3.5799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	32516775	33275436	85	-0.0573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	33277265	33709484	104	-0.271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	33719002	54354076	6967	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	54354095	54366725	10	1.342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	54366967	54399957	14	0.3407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	54400016	54401019	2	-1.8193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	54401223	85918894	23883	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	85919332	85919365	2	-1.9242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	85921879	88815036	1267	-0.0214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	526	18296117	11439	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	18299671	18353283	17	0.714
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	18367186	32758538	7609	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	32767971	32768189	4	-1.1519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	32769233	36675234	1899	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	36676540	36684057	24	1.1082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	36686250	41569943	2551	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	41571141	41717786	85	-0.3444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	41718140	42107462	49	0.4212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	42107479	69523175	16967	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	69523402	69526004	5	-0.9778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	69529607	78643088	4638	-0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	1543	1029386	751	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	1036304	1036560	4	-1.5441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	1037349	15391763	9692	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	15392408	17219520	174	0.5866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	17225143	49778199	21369	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	49778840	49779150	3	-1.7331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	49782366	76116029	18811	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	41910	14711996	5966	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	14716686	14717363	2	-1.9499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	14717638	20386516	3011	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	20388046	20513074	72	-0.7596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	20513302	48404090	11714	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	48404438	48448077	19	-0.8566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	48458499	51595206	1666	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	51598837	51602967	2	-1.4377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	51603022	56019905	1941	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	56024079	56025050	6	-0.8051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	56031019	56823625	554	-0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	56834164	56840009	11	-0.9203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	56846717	63789666	4381	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	9305	1500457	1184	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	1500503	1530092	57	-0.558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	1530207	7648108	4568	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	7648343	7649584	4	-1.3259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	7651420	16610218	7189	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	16610745	16615772	13	-1.0675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	16617877	28042184	7043	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	28050463	28143576	23	-0.4964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	28147343	34677733	2607	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	34683964	34724513	20	0.633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	34725563	62426597	19770	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	9758742	10197783	113	0.2435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	13267540	46921385	24293	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	22	14432528	14870546	67	0.544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	22	14870663	49581321	23482	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	108477	76239519	40141	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	76246673	76461534	23	-0.4846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	76462887	115051983	20660	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	115052431	115064666	6	-1.9889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	115070447	120804678	3506	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	120804715	120805364	3	-1.4758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	120808335	154835548	20268	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	2710438	6161425	838	-2.6967
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	6167901	6484299	128	-3.8768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	6486233	17572959	4413	-3.2395
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	17577516	17807379	97	-3.7589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	17809644	18080026	142	-3.158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	18080874	19547685	705	-3.7775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	19547873	22268551	1052	-3.2567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	22268856	22771258	114	-3.7851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	22771510	22919906	76	-3.1059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	22924247	24627620	323	-3.8416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	24632208	24818154	43	-2.9023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	24819177	24821991	3	-6.0747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	24826480	24923103	36	-2.6492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	24926921	25846090	94	-4.2119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	25854303	26127678	90	-2.9276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26129939	26687080	196	-3.8533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26699115	26731407	13	-5.3148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26731471	26833326	43	-3.5326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26847504	57427647	183	-2.8042
