Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	61735	1510801	225	-0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	1627918	1672603	16	-0.9681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	1687587	16149343	8166	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	16149915	16153925	7	-1.8885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	16154201	16851514	304	-0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	16869363	17261797	164	0.4429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	17261888	25583341	5267	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	25593128	25663344	33	0.592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	25673154	41021036	8171	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	41022076	41028210	4	-1.1103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	41028926	72768498	20662	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	72768916	72811148	46	-1.2694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	72811904	76050844	1931	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	76054763	76054854	2	-2.6865
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	76059509	106134245	19191	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	106135644	106136913	6	-1.9509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	106139463	108729284	1845	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	108729759	108737496	4	-1.1689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	108739104	110227515	724	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	110232974	110242953	18	1.304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	110244998	112690326	1955	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	112695965	112697241	23	-0.4897
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	112697376	149036524	6377	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	149040066	149256691	131	-0.6184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	149259416	152555767	1528	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	152555795	152586238	29	1.4718
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	152586278	158866573	3830	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	158868501	158869759	2	-1.5449
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	158874818	161508875	1651	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	161517939	161636875	39	-0.5708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	161636891	177811306	11562	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	177811355	177811499	3	-1.0948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	177812017	187715854	6684	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	187717560	187721369	2	-1.8716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	187724610	193155792	3571	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	193156279	193156332	3	-1.1619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	193156348	194448234	947	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	194451411	194455018	2	-1.5562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	194457016	196732086	1458	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	196738623	196783626	44	-0.5111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	196788986	196798643	24	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	196798664	196815791	24	-0.4715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	196816730	210071062	8818	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	210081613	210083984	3	1.1065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	210086552	213004455	1950	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	213005012	213010436	7	-1.1652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	213014453	227425301	9725	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	227426072	227426406	3	-1.2248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	227429178	249224388	15441	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	12784	3728561	2568	-0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	3732546	3733273	4	-0.9314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	3736538	4216452	419	-0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	4216469	4222432	26	0.3639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	4222484	13084077	6910	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	13088551	13093031	8	-0.7826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	13093538	14703694	1103	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	14704949	14710092	12	-1.0881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	14710364	18970472	3171	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	18970968	18978576	6	-0.7385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	18980784	34685280	9872	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	34691069	34737556	48	0.5162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	34738032	36088642	975	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	36089472	36089929	2	-1.2262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	36091829	40990662	3670	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	40990752	40991438	2	-1.6747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	40991806	52741737	8390	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	52743925	52787949	42	0.456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	52790140	53310426	428	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53313031	53338361	21	0.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53338610	75442644	14069	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	75443590	75505213	35	-1.2061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	75512148	90267121	8478	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	90269005	92101322	100	0.2624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	92105338	106874649	6527	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	106874722	106885357	13	0.4672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	106887255	127852021	12415	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	127857046	127857763	2	-2.3132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	127857946	145610747	10788	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145612273	145615921	5	-1.1902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145617152	146862085	734	-0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	146864404	146866934	24	-1.892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	146877806	164636852	10593	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	164643488	164645126	5	-1.1225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	164646642	184573947	12557	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184577193	184577324	3	-3.0673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184580895	184595398	26	-0.0758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184595739	184595767	2	-1.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184595970	204401318	11125	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204410680	204425598	6	-0.9932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204426761	213181322	5719	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	213186549	213191825	25	-0.9038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	213192126	229757006	10825	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	229759479	229764890	14	-0.6429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	229765383	243089456	8232	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	60345	26448926	19950	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26451273	26455284	3	-1.2439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26455761	26613201	121	0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26614974	26614985	8	0.69
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	26615949	28740089	1365	-0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	28741057	28741339	4	-0.9625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	28745091	46049708	11314	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	46049836	46051713	2	-1.8358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	46051743	98944476	31047	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	98944511	98949308	34	-0.4536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	98949314	112273871	8094	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	112274613	112278237	2	-2.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	112278816	129760622	10646	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	129761124	129806236	54	0.6122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	129806924	143285765	8371	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	143285800	143285974	4	1.2879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	143286801	162513092	11909	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	162513149	162528630	10	0.7674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	162530315	162540490	9	-0.8614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	162545716	162625995	48	0.5475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	162626572	195285664	20695	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	195285898	195473796	46	0.6236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	195474182	197896118	1174	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	12281	21366	9	0.0601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	21426	66719	49	0.4387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	68821	10210390	5748	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10214160	10223416	2	1.4495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10223628	10230812	22	0.2881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10230903	10390715	183	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10392354	10400668	16	-0.424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	10402718	34779004	16801	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	34779025	34779040	2	-1.804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	34779054	34824725	39	0.5818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	34829872	64693940	16581	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	64697469	64708258	29	-0.3164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	64716431	69260551	2861	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	69261064	69485979	87	-0.3429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	69489335	70389716	493	0.0526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	70389861	70390779	2	-2.2163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	70391888	71157709	487	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71161617	71281566	102	-1.1515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71287652	76302023	2952	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	76302665	76339792	19	-0.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	76339994	115173700	23671	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	115175323	115184252	25	-1.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	115184266	161874000	28026	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	161880018	161884958	23	-0.6404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	161884967	165650728	2473	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	165650749	165658643	6	-0.77
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	165661151	173428471	4851	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	173428588	173428643	2	1.6088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	173441132	181156156	4914	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181156559	181158380	3	-1.5488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181160545	181609886	385	-0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181613751	181614228	2	-2.3364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	181614368	191027923	6582	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	15532	2038142	1060	-0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	2044129	2063679	19	-1.0786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	2069531	12815780	9140	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	12815865	12826650	10	0.9528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	12833857	15718492	1980	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	15719222	15720597	11	-0.954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	15723346	17602802	1199	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	17603462	17696477	42	0.268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	17697390	29421269	6986	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29425829	29428012	2	-1.7651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29430191	32801755	2376	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	32805556	32806213	2	-1.1641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	32808047	33813994	665	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33814173	33814488	2	-1.9335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33814705	57321646	12393	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57326027	57333533	32	2.4292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57338357	57608284	220	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57608656	57609026	2	-0.8409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	57611717	58303558	520	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	58303626	58304705	5	-0.7783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	58304730	68846303	6556	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	68867294	69118135	5	1.2657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	69233427	152571543	51060	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	152571970	152582826	7	-0.8367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	152582849	180374523	18623	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	180378710	180417911	18	0.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	180418103	180790320	172	-0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	149661	254283	101	0.0588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	257353	329869	38	-0.3643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	330704	19040119	14649	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	19042181	19044869	8	-0.7399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	19044898	29836239	6930	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29836475	29837072	6	-0.611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29837187	29849267	16	0.7563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29850196	29874808	8	-0.1202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29876959	29898897	8	-1.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	29899677	31280823	656	-0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	31286276	31296451	11	1.0687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	31309924	32581889	551	-0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32582203	32601317	9	-0.956
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32602107	32624591	11	0.1304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32625095	32626618	4	1.3389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	32650612	53931151	13740	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	53931230	53931855	6	1.0314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	53935348	67775494	6142	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	67778266	67778527	3	-1.1392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	67785664	74591858	4376	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	74592225	74601410	10	0.8476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	74603555	77436532	1769	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	77439868	77452689	20	-0.6763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	77452757	78971781	985	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	78971802	79041633	109	0.344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	79041719	103737976	15486	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	103738039	103762061	45	-1.3693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	103765470	116640959	7989	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	116641641	116643080	2	-1.2075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	116644101	134266268	11095	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	134269071	134269632	2	-2.2832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	134272072	171051005	25151	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	43355	24357323	17523	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24357361	24357389	2	-2.1329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24357575	38297835	9910	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	38298322	38381971	113	-0.2732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	38384841	54380373	11014	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	54386505	54386517	6	-1.4635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	54393488	97395509	22160	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	97401932	97402475	8	-0.7492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	97404240	126044974	16701	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	126045482	126046615	12	-1.3777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	126046876	133778652	4708	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	133785177	133795634	26	0.5931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	133795665	135136605	1014	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	135136719	135143082	6	-1.1029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	135147425	141753153	4173	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	141753500	141815095	67	0.3223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	141815996	142476719	438	-0.0576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	142476764	142486345	28	0.6222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	142486495	143532978	557	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143532998	143547272	10	-0.5613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143568059	143904279	271	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	143909235	144027576	34	-0.3928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	144033851	152573935	5115	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	152578863	152579987	2	-2.3346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	152586523	159127004	4585	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	31254	5594267	6094	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	5598726	5604495	27	-0.8656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	5607088	6988926	1690	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	6995117	7250380	45	0.2533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	7254291	7809891	149	-0.4569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	7809906	10130696	1892	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	10131241	10131459	2	-1.399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	10131610	11949551	1398	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	11987726	12001123	6	-0.8802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12034307	12247486	49	0.0437
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12260927	12268979	9	-0.8397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	12269712	39230325	19540	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39230659	39386965	60	0.8726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39388299	39830700	268	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39830957	39831647	3	-0.7873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	39834819	40182117	317	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	40183797	40189467	31	-0.9703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	40189482	70927373	16559	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	70927758	70929025	3	-1.5467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	70931383	92875015	12917	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	92875188	92875464	3	-1.0546
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	92878048	103992590	6945	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	103994911	103997435	3	-1.4541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	103998546	112291494	4991	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	112294279	112295260	10	-1.2053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	112300281	129742275	11659	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	129743893	129764085	11	-0.7176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	129777454	146298155	11259	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	46587	602903	513	0.0374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	606699	606961	4	-1.9331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	607307	44446136	30955	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	44469328	44808486	30	0.8045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	44820541	74987577	3471	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74989572	74989643	2	-1.3915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74992266	90522594	11162	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	90554151	90554219	2	-1.594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	90557957	93607883	2033	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	93609363	93609773	4	-0.8879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	93610132	94402150	650	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	94402206	94403545	17	-0.7891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	94403710	141091394	31074	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	72759	42523461	29190	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	42525124	42782884	29	0.4707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	42783494	46293619	2343	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	46312487	46511281	5	1.072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	46527677	55552196	4947	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55558902	55581663	23	-1.0009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55584798	67309007	8207	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	67309010	67314430	13	-0.5585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	67314446	71282472	2551	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	71282486	71291614	5	-0.7122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	71292246	75678824	2747	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75686233	75845943	82	0.5408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75847911	91589048	10998	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91589281	91593216	6	-1.3323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91594502	135506704	29917	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	198510	1653568	494	-0.0366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	1654565	1654761	2	-1.7341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	1657127	4238406	1292	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	4239054	4346809	30	0.6048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	4352981	5783923	1485	-0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	5787405	5809461	35	-0.4803
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	5812360	48598422	30088	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	48601434	48602676	2	-2.0515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	48606318	55376511	1235	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	55376634	55439990	37	0.4066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	55442318	134944770	52420	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	150442	2235889	1266	-0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	2245862	2257920	40	-0.6563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	2258023	11219423	5963	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	11220724	11241532	12	1.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	11251874	20320594	6196	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	20322691	20329378	2	-1.5658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	20335201	90483350	42329	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	90491669	90492074	7	-1.2716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	90493557	98950490	5949	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	98956245	98957988	2	-1.5832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	98962082	132120715	22711	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	132132584	132144196	28	0.4333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	132152732	133778189	556	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	19026949	23629210	2899	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	23632678	23633515	12	-0.6488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	23638195	25029373	1135	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	25029388	25039598	14	-0.4246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	25039678	38071135	9504	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	38072036	38084757	16	0.7044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	38088330	55199657	11236	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	55199917	55200003	2	-1.4034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	55200147	115108397	39468	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	19002124	19422533	29	-0.0699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	19432799	20422583	160	0.6077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	20423372	22397143	1378	-0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	22398015	22968932	481	-0.3494
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	22968996	106868286	53246	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	106868554	106918108	54	-0.6673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	106918649	107285437	224	0.044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	20016328	20269773	57	0.0678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	20284066	20585988	49	0.3653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	20586090	20586957	11	1.0636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	20590027	20843562	42	0.4099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	20847933	34723576	7661	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	34727172	34818317	63	-0.7361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	34830253	53784888	11646	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	53784991	53785279	6	-1.8063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	53790247	65814102	8257	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	65816942	65818387	3	-2.3169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	65822534	76878362	6546	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	76891241	76895775	22	0.9776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	76902179	83043161	3660	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	83046078	83108839	7	-0.9745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	83169549	84540717	764	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	84540738	84543550	6	-0.9799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	84547277	92765755	5799	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	92765874	92766294	3	1.4439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	92766758	102469040	7441	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	60777	32588622	20154	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	32588901	32588909	5	-3.5799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	32609274	33367935	85	-0.0573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	33369764	33801983	104	-0.271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	33811501	55796575	6967	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	55796594	55809224	10	1.342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	55809466	55842456	14	0.3407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	55842515	55843518	2	-1.8193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	55843722	87361393	23801	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	87361831	87361864	2	-1.9242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	87364378	90287535	1270	-0.0216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	526	18355392	11440	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	18358946	18412558	17	0.714
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	18426461	35684425	7609	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	35693858	35694076	4	-1.1519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	35695120	39421708	1897	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	39423014	39430531	24	1.1082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	39432724	44214166	2551	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	44215364	44362009	85	-0.3444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	44362363	44752283	49	0.4212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	44752300	72011580	16968	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	72011807	72014409	5	-0.9778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	72018012	81049726	4638	-0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	11543	1039386	751	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	1046304	1046560	4	-1.5441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	1047349	15401763	9692	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	15402408	18965522	174	0.5866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	18971145	51524201	21367	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	51524842	51525152	3	-1.7331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	51528368	78015057	18810	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	90910	14850996	5966	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	14855686	14856363	2	-1.9499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	14856638	20594676	3010	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	20596206	20721234	72	-0.7596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	20721462	43712250	11714	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	43712598	43756237	19	-0.8566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	43766659	46903366	1666	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	46906997	46911127	2	-1.4377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	46911182	51328093	1941	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	51332267	51333238	6	-0.8051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	51339207	52131813	554	-0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	52142352	52148197	11	-0.9203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	52154905	59097854	4381	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	61305	1552457	1184	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	1552503	1582092	57	-0.558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	1582207	7700108	4570	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	7700343	7701584	4	-1.3259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	7703420	16662218	7190	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	16662745	16667772	13	-1.0675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	16669877	29428523	7043	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	29436802	29529915	23	-0.4964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	29533682	35244319	2607	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	35250550	35291099	20	0.633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	35292149	62956153	19770	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	10736871	11175912	113	0.2435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	14345669	48096957	24292	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	22	16052528	16490546	67	0.544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	22	16490663	51234455	23482	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	168477	76323128	40151	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	76330282	76545159	23	-0.4846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	76546512	115137955	20635	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	115138403	115150638	6	-1.9889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	115156419	120976997	3504	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	120977034	120977683	3	-1.4758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	120980654	155182354	20272	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	2650438	2912181	133	-3.1485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	2915500	5944602	671	-2.4938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	5944603	6101425	67	-2.9995
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	6107901	6424299	128	-3.8768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	6426233	19063565	4424	-3.233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	19068122	19297985	97	-3.7589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	19300250	19570632	142	-3.158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	19571480	21088297	705	-3.7775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	21088485	23859163	1053	-3.2564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	23859468	24361870	114	-3.7851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	24362122	24510518	76	-3.1059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	24514859	26218232	323	-3.8416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26222820	26408766	43	-2.9023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26409789	26412603	3	-6.0747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26417092	26513715	36	-2.6492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	26517533	27436702	94	-4.2119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	27444915	27718290	90	-2.9276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	27720551	28277692	196	-3.8533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	28289727	28322019	13	-5.3148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	28322083	28423938	43	-3.5326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	Y	28438116	59018259	183	-2.8042
