Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	3208470	245880329	128968	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	474222	53163930	31173	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53166535	53191865	21	0.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53192114	145327217	44446	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145328743	145332391	5	-1.1902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145333622	184303643	23036	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184303984	184304012	2	-1.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184304215	204109563	9330	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204118925	204133843	6	-0.9932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204135006	240604553	22387	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	240605583	240612611	6	-0.8233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	240614358	242124735	780	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	526235	113756561	60924	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	113757303	113760927	2	-2.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	113761506	199023074	45381	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	1043934	71192298	38194	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71196206	71316155	70	-1.1886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71322241	189836143	64391	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	967233	29457026	16791	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29461586	29463769	2	-1.7651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29465948	32837512	2285	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	32841313	32841970	2	-1.1641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	32843804	33849751	651	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33849930	33850245	2	-1.9335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33850462	180293075	80709	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	959281	170745844	96410	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	671810	24323848	12506	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24323886	24323914	2	-2.1329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24324100	158077879	68751	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	607667	71089927	38071	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	71090312	71091579	3	-1.5467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	71093937	145304484	43396	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	779932	1581333	193	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	1582138	1582353	2	1.0748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	1582554	13106019	6361	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	13107676	13112221	2	-1.2608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	13112482	74177397	19657	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74179392	74179463	2	-1.3915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74182086	140058573	41754	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	405240	55222202	31650	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55228908	55251669	23	-0.9996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55254804	75348830	11619	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75356239	75515949	82	0.5408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75517917	86417483	6921	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	86417728	86417800	2	-1.1861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	86418457	91579028	3296	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91579261	91583196	6	-1.3275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91584482	132871265	26576	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	132871569	132872427	5	0.8235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	132872464	135075077	623	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	446120	133647740	77200	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	760163	131671419	73908	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	18348806	114005560	56600	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	19571208	29880779	5082	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	29887928	29889124	3	-1.3019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	29891673	80489242	29519	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	80490527	80491098	2	1.4675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	80492930	105059083	14803	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	21238778	84748576	35195	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	84753896	84754072	2	-1.2368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	84756299	91017461	4331	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	91019081	91019349	3	-1.061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	91022256	99701830	4966	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	593460	87907437	40835	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	933971	4592813	1582	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	4593229	4595438	2	-1.2601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	4596534	78510305	35379	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	319586	14650482	8205	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	16943745	17219520	110	0.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	17225143	59738698	26704	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	59738712	59738730	2	-1.459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	59738774	75210228	7608	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	235018	51595206	19066	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	51598837	51602967	2	-1.4377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	51603022	63570038	4864	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	403764	34677733	19337	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	34683964	34724513	20	0.633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	34725563	61690281	17899	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	14269492	35423611	13433	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	35423991	35432314	12	-0.4837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	35432652	46503202	7127	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	22	15803930	47717016	16912	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	3167107	154558783	63761	0.0014
