Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	1	3218610	247813706	129024	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	484222	53310426	31169	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53313031	53338361	21	0.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	53338610	145610747	44439	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145612273	145615921	5	-1.1902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	145617152	184595398	23036	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184595739	184595767	2	-1.5583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	184595970	204401318	9333	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204410680	204425598	6	-0.9932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	204426761	240955880	22387	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	240956910	240963938	6	-0.8233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	2	240965685	242476062	780	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	2212571	112273871	60919	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	112274613	112278237	2	-2.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	3	112278816	197538677	45380	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	1053934	71157709	38191	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71161617	71281566	70	-1.1886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	4	71287652	188763651	64399	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	914233	29421269	16793	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29425829	29428012	2	-1.7651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	29430191	32801755	2285	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	32805556	32806213	2	-1.1641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	32808047	33813994	651	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33814173	33814488	2	-1.9335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	5	33814705	180360469	80707	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	6	1014281	170903919	96419	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	705284	24357323	12508	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24357361	24357389	2	-2.1329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	7	24357575	158385118	68750	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	617667	70927373	38074	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	70927758	70929025	3	-1.5467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	8	70931383	145232496	43400	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	789932	1591333	193	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	1592138	1592353	2	1.0748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	1592554	13116019	6362	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	13117676	13122221	2	-1.2608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	13122482	74987577	19662	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74989572	74989643	2	-1.3915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	9	74992266	140938752	41760	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	415240	55552196	31650	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55558902	55581663	23	-0.9996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	55584798	75678824	11618	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75686233	75845943	82	0.5408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	75847911	86427503	6923	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	86427748	86427820	2	-1.1861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	86428477	91589048	3294	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91589281	91593216	6	-1.3275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	91594502	132981275	26575	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	132981579	132982437	5	0.8235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	10	132982474	135225087	623	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	11	456120	134142530	77190	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	12	889902	133161346	73903	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	13	19450806	114987458	56596	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	20501368	30811028	5082	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	30818177	30819373	3	-1.3019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	30821922	81419489	29516	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	81420774	81421345	2	1.4675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	14	81423177	105988038	14804	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	23687685	86947572	35194	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	86952892	86953068	2	-1.2368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	86955295	93216457	4331	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	93218077	93218345	3	-1.061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	15	93221252	101884307	4965	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	16	653459	89379936	40769	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	17	987221	80917016	36963	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	329586	14660482	8205	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	18689747	18965522	110	0.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	18971145	61587718	26703	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	61587732	61587750	2	-1.459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	18	61587794	77109240	7606	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	284018	46903366	19066	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	46906997	46911127	2	-1.4377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	19	46911182	58878226	4864	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	455764	35244319	19340	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	35250550	35291099	20	0.633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	20	35292149	62219837	17899	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	15347621	36501741	13434	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	36502121	36510444	12	-0.4837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	21	36510782	47678774	7125	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	22	17423930	49331012	16911	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A10_896554	X	3157107	154905589	63778	0.0014
