Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	51598	88451	16	-1.1664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	88465	25455928	14145	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	25465715	25534592	30	0.6086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	25534799	54862788	16037	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	54865879	54866977	2	-2.6114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	54869038	72541086	12736	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	72541504	72584492	47	0.508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	72585028	103090257	19740	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	103090831	103094307	2	-3.5887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	103094929	110034850	3992	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	110035094	110035933	3	-1.3228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	110036078	111177743	847	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	111178891	111189749	39	-0.6651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	111193590	147216799	7486	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	147220620	147523315	136	-0.6003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	147526040	150827165	1533	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	150827492	150852342	20	-0.9763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	150852741	151026302	176	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	151028547	151040529	38	0.6089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	151043379	159763524	5272	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	159763944	159905137	54	0.5108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	159914861	247191011	60284	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	2784	4183562	2987	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	4191739	4201570	39	-0.5165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	4201600	52595241	34184	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52597429	52612257	9	0.76
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52612272	52619198	18	0.3284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52634341	52634799	6	0.8611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52634830	86981712	22022	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	86982714	86990896	2	-1.7955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	87015364	89386116	876	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	89395525	89867862	131	-0.6515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	89868849	89885120	20	-1.1468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	89885612	91050433	28	-0.5167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	91068463	95534297	395	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	95534913	95654014	37	0.5777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	95660369	97239504	562	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	97239927	97240533	3	-1.1965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	97240728	97484644	26	0.0763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	97507179	97528621	9	0.8464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	97533310	138204570	24388	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	138205997	138211717	2	-1.8978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	138212362	159990840	13219	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	159998765	160057862	29	-0.9071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	160060830	229465065	42841	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	229465113	229468080	11	-0.5961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	229468157	242738129	8241	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	35345	32057050	23962	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	32058476	32058486	2	-2.2184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	32059101	53006776	11833	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	53006790	53013984	33	-1.6446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	53014140	53016559	12	-0.4269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	53016894	68828854	12031	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	68828949	68830103	14	-1.3686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	68831448	84184912	9638	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	84188123	84188856	2	-3.0989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	84193657	126918927	22627	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	126926298	126941452	10	0.8408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	126945019	129881911	1840	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	129887861	129896851	8	0.7553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	129903856	131246388	625	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	131249276	131288926	51	-1.1658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	131289614	164007552	20306	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	164011324	164023167	9	-0.7575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	164023184	164197211	121	-0.0486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	164200421	164202256	2	-2.478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	164208853	193547511	18545	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	193548597	193548654	2	-2.0493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	193548697	194360656	580	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	194360739	194365597	18	1.054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	194369129	196032677	1097	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	196033063	196033281	3	-1.0533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	196036103	199380515	1607	0.0462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	2281	9066075	5252	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9070328	9074070	3	-1.3748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9079832	9819488	552	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9832514	9843364	30	-1.8995
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9843706	9844366	5	-0.6524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9845240	9999813	171	0.0229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10001452	10009766	16	0.4754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10011816	34462895	16809	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	34463350	34500578	36	0.5921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	34501120	59655613	13830	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	59656666	59671672	10	0.6071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	59673471	64376535	2749	-0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	64380064	64390853	29	0.4418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	64399026	68902978	2853	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	68909443	68967186	9	0.4075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	68970733	68977394	4	-1.1824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	68987534	69054598	11	0.15
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	69057536	69171930	66	0.471
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	69187710	70158099	331	0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	70162233	70266713	56	-0.5952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	70270740	88989253	11563	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	88989318	88989424	4	1.077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	88989583	115393149	15795	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	115394772	115403678	24	0.6767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	115403701	189458252	46107	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189458354	189458418	3	2.2388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189458433	189742098	284	0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189742448	189742914	3	-2.8286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189743522	191261904	891	0.0399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	68532	12844720	10220	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	12853889	12891533	15	-0.8369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	12902201	177131055	100901	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	177160157	177165211	3	3.2984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	177187571	177239241	7	-0.3746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	177242943	180311494	1809	0.0261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	180312809	180365831	18	0.7847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	180365870	180610545	152	0.0911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	180611323	180722926	18	-0.2347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	94661	198861	99	0.0596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	199267	300386	75	-0.2878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	300536	9103624	7226	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	9119775	9122876	2	1.6216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	9141797	31385665	15026	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	31388802	31404430	12	1.0461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	31417903	34045784	1384	0.0693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	34045977	34050683	8	-0.8901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	34052564	54039110	12930	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	54039189	54043657	9	1.1304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	54043750	71530359	8475	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	71531751	71532023	2	-1.4603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	71532076	77493251	3824	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	77496587	77509101	15	-3.9555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	77509111	77509476	6	-1.3834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	77517792	79025784	980	-0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	79025824	79091659	108	0.3694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	79091746	103844669	15493	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	103844732	103868754	45	0.6504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	103872163	170892930	44251	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	52911	38353968	27562	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	38357890	38363001	4	-1.6838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	38364572	54347867	11014	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	54353999	54354011	6	1.3247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	54360982	97233396	22158	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	97233398	97240411	15	-1.8321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	97242176	125832210	16704	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	125832718	125834112	13	-1.1089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	125834113	133435735	4705	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	133435751	133446174	24	0.5763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	133446205	142154515	5701	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	142156294	142165614	27	-2.2784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	142165684	143504885	840	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	143527185	143697880	44	-0.8607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	143705862	158819765	9698	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	21254	584973	329	0.0619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	585220	585875	6	0.8802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	585892	585908	2	3.6918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	591043	3332114	2470	0.0299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3332437	3333714	2	-1.4094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3333743	3989600	982	0.0255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3989615	3989724	3	-1.0412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3990061	3990713	10	0.1404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3990871	3990886	2	-2.8219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3990969	7174056	4027	0.0351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7181231	7225429	25	-0.4619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7237790	7781474	112	-0.0965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7783389	7784544	3	-1.7636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7785109	12690760	3545	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	12693099	12696897	4	-1.3482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	12697904	39349816	19383	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	39354760	39506122	59	0.7848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	39507456	82151576	24010	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	82154253	82156334	5	-1.0777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	82158147	112363455	18042	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	112363470	112364378	7	-0.8491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	112364421	112364436	2	-3.3513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	112369457	115704296	1834	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	115704404	115710907	27	-0.5558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	115719873	146268959	21075	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	36587	23351805	20461	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	23353115	23363484	8	0.8426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	23368488	24493816	797	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	24494125	24507682	19	-0.6864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	24509684	41836811	10070	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	41882866	41975187	7	1.0755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	42013107	44336923	109	-0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	44344908	44795733	41	0.6503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	44806024	85388332	11426	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	85392277	85393241	5	-0.9667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	85395624	97290052	8257	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	97290091	97290779	3	1.1365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	97293475	97411261	129	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	97412339	97416942	6	0.5861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	97417012	99901167	1455	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	99901208	99922702	17	-1.1005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	99924385	139375463	26704	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	139375539	139375654	2	-1.2144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	139392824	140211215	413	0.0512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	62759	17934982	14888	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	17967560	17978214	2	1.8026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	17989863	18213969	14	0.0457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	18225129	18236775	2	-2.5716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	18239819	24415269	4344	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	24417680	24418060	11	-1.7177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	24418914	27627537	2204	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	27633433	27637444	2	-1.5181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	27647191	31286516	2840	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	31291340	31291744	10	-0.5918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	31291785	44575837	6693	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	44576198	44578299	2	-1.3032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	44578499	45390058	509	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	45392878	45396241	5	-0.982
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	45400342	56850122	6151	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	56850159	56850323	4	-1.5406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	56850327	66976282	7071	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	66977929	66984248	25	-0.4868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	66984407	94322696	18049	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	94328119	94328537	2	1.4056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	94329324	126055199	21618	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	126055933	126055950	2	-1.6399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	126060139	135356694	6654	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	188510	5747539	3314	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	5750017	5765715	24	0.554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	5765914	25196163	14456	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	25204534	25253029	43	0.8812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	25253030	49714247	16064	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	49714343	49717264	11	-0.7757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	49722737	50952948	365	0.0384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	50983318	51019825	3	-1.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	51021761	55119916	384	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	55130608	55198894	48	0.4152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	55200787	79645161	13309	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	79645196	79645212	2	-2.8296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	79645334	81190057	1325	-0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	81192975	81194806	5	-0.968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	81200280	101099594	14021	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	101103070	101103174	4	1.376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	101103422	134449982	23783	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	20703	11105412	7271	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	11106639	11132799	15	-1.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	11143141	19358279	5585	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	19366037	19467722	51	0.447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	19468203	132288262	72179	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	13	17924949	71374989	35165	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	13	71375556	71378557	4	-2.1885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	13	71378606	114126499	29151	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	18072124	18487203	28	0.056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	18492533	19107146	46	0.7739
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	19170042	19227683	7	-0.2735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	19270023	19493212	109	0.7435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	19494766	21462988	1355	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	21463199	21463361	2	-1.8461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	21463385	23514669	1380	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	23514818	23554299	24	-0.6011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	23557983	73065527	31388	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	73070876	73099653	10	1.6744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	73099668	105150069	20664	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	105150692	105238532	14	-0.8121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	105265522	105531947	107	0.0567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	105550720	105553341	4	-1.4944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	105558085	105822329	120	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	105824904	105824912	3	-1.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	105825048	106356482	330	0.0958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	18276341	18544080	58	-0.0272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	18551327	18867572	75	-0.3325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	18867619	19792388	178	-0.7239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	19794591	22225844	1117	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	22225980	22264518	30	-0.5595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	22264715	59471497	23769	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	59475461	59484966	11	-0.9119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	59484983	100286563	26835	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	777	32496123	20168	0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	32496402	32496407	4	-4.0268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	32496410	32650790	27	-0.4562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	32650982	33277265	60	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	33279107	33539331	80	-0.3241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	33550900	76930347	21529	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	76930838	76933878	4	-1.4331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	76934212	81753452	5327	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	81753726	81766799	19	-0.8307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	81768457	88815036	5305	0.021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	526	9905657	5786	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	9907785	9930662	18	0.4594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	9931795	16595026	4704	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	16598056	16697872	17	0.5323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	16704280	18260587	917	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18296117	18399997	27	-1.279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18405311	18905947	177	-0.0576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18906254	18956377	4	-1.2787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18970881	36676540	9327	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	36676552	36683976	22	0.9886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	36684057	78643088	24304	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	1543	10899186	8050	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	10901888	10911799	7	-0.9067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	10914184	74389423	41806	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	74392903	74394967	17	-0.8336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	74395131	76116029	940	0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	19	41910	40541027	16823	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	19	40541061	40553010	21	-0.544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	19	40553489	63789666	12510	0.0171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	9305	1508999	1205	0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	1509580	1530207	36	1.4421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	1538257	28042184	18826	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	28050463	28078753	9	-0.8748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	28081553	62426597	22428	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	9758742	13368583	130	0.0822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	13374733	13463240	17	-0.5454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	13471836	28298981	10723	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	28299553	28302461	2	-1.8622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	28302664	46921385	13541	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	14432528	21082462	3648	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	21082680	21082880	4	1.2743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	21087321	22600777	931	0.037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	22601123	22674422	40	-0.4063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	22680529	22726814	19	0.687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	22731529	37693565	10869	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	37693630	37705253	23	-0.5567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	37719574	49581321	8029	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	108477	32946256	20628	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	32947003	32948977	2	-2.6834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	32949041	42497582	5673	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	42499232	42500320	4	-1.7602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	42500533	55707456	5983	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	55717658	55724281	5	-1.523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	55724411	71269246	5590	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	71270383	71271636	3	-3.1408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	71273794	154835548	46620	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	Y	2710438	57427647	8590	-0.93
