Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	61735	98588	16	-1.1664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	98602	25583341	14143	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	25593128	25662005	30	0.6086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	25662212	55090200	16035	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	55093291	55094389	2	-2.6114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	55096450	72768498	12818	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	72768916	72811904	47	0.508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	72812440	103317669	19731	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	103318243	103321719	2	-3.5887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	103322341	110233327	3992	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	110233571	110234410	3	-1.3228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	110234555	111376220	847	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	111377368	111388226	39	-0.6651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	111392067	148950175	7482	0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	148953996	149256691	136	-0.6003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	149259416	152560541	1534	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	152560868	152585718	20	-0.9763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	152586117	152759678	176	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	152761923	152773905	38	0.6089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	152776755	161496900	5272	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	161497320	161638513	54	0.5108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	161648237	179331382	12645	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	179333098	179339206	3	-1.2224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	1	179339262	249224388	47633	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	12784	4205687	2987	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	4213864	4223695	39	-0.5165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	4223725	52741737	34181	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52743925	52758753	9	0.76
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52758768	52765694	18	0.3284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52780837	52781295	6	0.8611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	52781326	87128201	22017	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	87129203	87137385	2	-1.7955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	87161853	89593755	867	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	89596294	90230557	137	-0.6368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	90231544	90247815	20	-1.1468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	90248307	91686706	28	-0.5167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	91704736	96170570	395	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	96171186	96290287	37	0.5777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	96296642	97875777	562	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	97876200	97876806	3	-1.1965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	97877001	98118212	26	0.0763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	98140747	98162189	9	0.8464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	98166878	138488100	24385	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	138489527	138495247	2	-1.8978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	138495892	160282594	13218	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	160290519	160349616	29	-0.9071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	160352584	229756821	42844	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	229756869	229759836	11	-0.5961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	2	229759913	243089456	8241	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	60345	32082046	23961	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	32083472	32083482	2	-2.2184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	32084097	53031736	11835	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	53031750	53038944	33	-1.6446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	53039100	53041519	12	-0.4269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	53041854	68746164	12030	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	68746259	68747413	14	-1.3686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	68748758	84102222	9635	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	84105433	84106166	2	-3.0989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	84110967	125436237	22624	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	125443608	125458762	10	0.8408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	125462329	128399221	1840	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	128405171	128414161	8	0.7553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	128421166	129763698	625	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	129766586	129806236	51	-1.1658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	129806924	162524858	20305	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	162528630	162540473	9	-0.7575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	162540490	162714517	121	-0.0486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	162717727	162719562	2	-2.478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	162726159	192877962	19128	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	192878045	192882903	18	1.054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	192886435	194551388	1097	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	194551774	194551992	3	-1.0533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	3	194554814	197896118	1607	0.0462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	12281	9456977	5252	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9461230	9464972	3	-1.3748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	9470734	10210390	552	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10223416	10234266	30	-1.8995
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10234608	10235268	5	-0.6524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10236142	10390715	171	0.0229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10392354	10400668	16	0.4754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	10402718	34786500	16809	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	34786955	34824183	36	0.5921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	34824725	59973018	13828	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	59974071	59989077	10	0.6071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	59990876	64693940	2748	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	64697469	64708258	29	0.4418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	64716431	69244434	2855	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	69255070	69256759	3	1.201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	69256760	69372003	25	-0.2964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	69374941	69489335	66	0.471
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	69505115	70123510	327	0.0473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	70127644	70232124	56	-0.5952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	70236151	88770229	11564	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	88770294	88770400	4	1.077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	88770559	115173700	15798	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	115175323	115184229	24	0.6767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	115184252	189221258	46111	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189221360	189221424	3	2.2388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189221439	189505104	284	0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189505454	189505920	3	-2.8286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	4	189506528	191027923	890	0.0397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	15532	12791720	10222	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	12800889	12838533	15	-0.8369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	12849201	177198449	100900	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	177227551	177232605	3	3.2984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	177254965	177306635	7	-0.3746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	177310337	180378888	1809	0.0261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	180380203	180433225	18	0.7847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	180433264	180677939	152	0.0911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	5	180678717	180790320	18	-0.2347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	149661	253861	99	0.0596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	254267	355386	75	-0.2878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	355536	31277686	22253	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	31280823	31296451	12	1.0461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	31309924	32431105	500	0.0475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	32431147	32602107	61	0.6776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	32602269	32690027	59	0.1831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	32690797	32690812	2	2.6586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	32690830	33937806	762	0.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	33937999	33942705	8	-0.8901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	33944586	53931151	12931	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	53931230	53935698	9	1.1304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	53935791	71473638	8476	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	71475030	71475302	2	-1.4603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	71475355	77436532	3823	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	77439868	77452382	15	-3.9555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	77452392	77452757	6	-1.3834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	77461073	78969065	980	-0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	78969105	79034940	108	0.3694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	79035027	103737976	15492	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	103738039	103762061	45	0.6504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	6	103765470	171051005	44258	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	43355	38387443	27560	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	38391365	38396476	4	-1.6838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	38398047	54380373	11012	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	54386505	54386517	6	1.3247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	54393488	97395460	22163	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	97395462	97402475	15	-1.8321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	97404240	126044974	16706	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	126045482	126046876	13	-1.1089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	126046877	133785195	4706	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	133785211	133795634	24	0.5763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	133795665	142474939	5701	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	142476719	142486045	27	-2.2784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	142486115	143873952	838	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	143896252	144066947	44	-0.8607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	7	144074929	159127004	9699	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	31254	594973	329	0.0619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	595220	595875	6	0.8802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	595892	595908	2	3.6918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	601043	3344706	2471	0.0299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3345029	3346306	2	-1.4094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	3346335	4002192	982	0.0255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	4002207	4002316	3	-1.0412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	4002653	4003305	10	0.1404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	4003463	4003478	2	-2.8219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	4003561	7186646	4027	0.0351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7193821	7238019	25	-0.4619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7250380	7744064	112	-0.0965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7745979	7747134	3	-1.7636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	7747699	12646389	3544	0.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	12648728	12652526	4	-1.3482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	12653533	39230659	19384	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	39235603	39386965	59	0.7848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	39388299	81989021	24013	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	81991698	81993779	5	-1.0777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	81995592	112294279	18043	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	112294294	112295202	7	-0.8491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	112295245	112295260	2	-3.3513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	112300281	115635120	1837	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	115635228	115641731	27	-0.5558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	8	115650697	146298155	21074	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	46587	23361805	20464	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	23363115	23373484	8	0.8426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	23378488	24503816	797	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	24504125	24517682	19	-0.6864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	24519684	41846811	10075	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	41892866	41985187	7	1.0755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	42023107	44396927	109	-0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	44404912	44855737	41	0.6503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	44866028	86198512	11428	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	86202457	86203421	5	-0.9667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	86205804	98250231	8258	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	98250270	98250958	3	1.1365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	98253654	98371440	129	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	98372518	98377121	6	0.5861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	98377191	100861346	1455	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	100861387	100882881	17	-1.1005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	100884564	140255642	26708	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	140255718	140255833	2	-1.2144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	9	140273003	141091394	413	0.0512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	72759	17894976	14888	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	17927554	17938208	2	1.8026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	17949857	18173963	14	0.0457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	18185123	18196769	2	-2.5716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	18199813	24375263	4343	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	24377674	24378054	11	-1.7177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	24378908	27587531	2204	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	27593427	27597438	2	-1.5181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	27607185	31246510	2840	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	31251334	31251738	10	-0.5918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	31251779	45255831	6693	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	45256192	45258293	2	-1.3032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	45258493	46070052	509	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	46072872	46076235	5	-0.982
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	46080336	57180116	6151	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	57180153	57180317	4	-1.5406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	57180321	67306276	7071	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	67307923	67314242	25	-0.4868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	67314401	94332716	18048	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	94338139	94338557	2	1.4056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	94339344	126065209	21617	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	126065943	126065960	2	-1.6399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	10	126070149	135506704	6654	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	198510	5790963	3313	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	5793441	5809139	24	0.554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	5809338	25239587	14455	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	25247958	25296453	43	0.8812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	25296454	49757671	16062	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	49757767	49760688	11	-0.7757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	49766161	51096372	365	0.0384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	51126742	51163249	3	-1.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	51165185	55363340	384	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	55374032	55442318	48	0.4152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	55444211	79967513	13310	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	79967548	79967564	2	-2.8296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	79967686	81512409	1324	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	81515327	81517158	5	-0.968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	81522632	101594384	14018	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	101597860	101597964	4	1.376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	11	101598212	134944770	23779	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	150442	11214145	7270	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	11215372	11241532	15	-1.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	11251874	19467012	5584	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	19474770	19576455	51	0.447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	12	19576936	133778189	72173	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	13	19026949	72476988	35162	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	13	72477555	72480556	4	-2.1885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	13	72480605	115108397	29150	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	19002124	19417203	28	0.056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	19422533	20037146	46	0.7739
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	20100326	20157843	7	-0.2735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	20200183	20423372	109	0.7435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	20424926	22393148	1355	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	22393359	22393521	2	-1.8461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	22393545	24444829	1380	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	24444978	24484459	24	-0.6011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	24488143	73995774	31384	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	74001123	74029900	10	1.6744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	74029915	106079024	20665	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	106079647	106167487	14	-0.8121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	106194477	106460902	107	0.0567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	106479675	106482296	4	-1.4944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	106487040	106751284	120	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	106753859	106753867	3	-1.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	106754003	107153173	240	0.07
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	107160325	107179847	21	0.4398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	14	107184184	107285437	69	0.081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	20016328	20284066	58	-0.0272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	20291313	20607558	75	-0.3325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	20607605	22291024	178	-0.723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	22293227	24674751	1117	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	24674887	24713425	30	-0.5595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	24713622	61684205	23767	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	61688169	61697674	11	-0.9119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	15	61697691	102469040	26834	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	60777	32588622	20166	0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	32588901	32588906	4	-4.0268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	32588909	32743289	27	-0.4562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	32743481	33369764	60	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	33371606	33631830	80	-0.3241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	33643399	78372846	21447	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	78373337	78376377	4	-1.4331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	78376711	83195951	5327	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	83196225	83209298	19	-0.8307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	16	83210956	90287535	5308	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	526	9964932	5787	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	9967060	9989937	18	0.4594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	9991070	16654301	4704	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	16657331	16757147	17	0.5323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	16763555	18319862	917	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18355392	18459272	27	-1.279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18464586	18965222	177	-0.0576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	18965529	19015652	4	-1.2787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	19030156	39423014	9325	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	39423026	39430450	22	0.9886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	17	39430531	81049726	24305	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	11543	10909186	8052	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	10911888	10921799	7	-0.9067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	10924184	76288435	41801	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	76291915	76293979	17	-0.8336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	18	76294143	78015057	940	0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	19	90910	35849187	16822	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	19	35849221	35861170	21	-0.544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	19	35861649	59097854	12510	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	61305	1560999	1205	0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	1561580	1582207	36	1.4421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	1590257	29428523	18829	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	29436802	29465092	9	-0.8748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	20	29467892	62956153	22428	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	10736871	14446712	130	0.0822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	14452862	14541369	17	-0.5454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	14549965	29377110	10723	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	29377682	29380590	2	-1.8622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	21	29380793	48096957	13540	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	16052528	22752462	3648	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	22752680	22752880	4	1.2743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	22757321	24270777	931	0.037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	24271123	24344422	40	-0.4063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	24350529	24396814	19	0.687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	24401529	39363619	10868	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	39363684	39375307	23	-0.5567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	22	39389628	51234455	8030	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	168477	33036335	20630	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	33037082	33039056	2	-2.6834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	33039120	42612638	5673	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	42614288	42615376	4	-1.7602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	42615589	55690731	5984	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	55700933	55707556	5	-1.523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	55707686	71352521	5597	0.0146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	71353658	71354911	3	-3.1408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	X	71357069	155182354	46597	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A11_896460	Y	2650438	59018259	8635	-0.9299
