Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	51598	88451	16	-0.6124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	88465	16889459	8762	-0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	16889467	16889665	2	-0.5383
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	16890117	16921066	17	-1.1293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	16929044	17067742	26	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	17076084	17172760	74	-0.4035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	17174259	72541086	34028	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	72541504	72583736	46	-1.3885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	72584492	81930074	6042	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	81935835	81936945	2	-1.2685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	81937105	103960907	14028	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	103965022	104069745	27	0.832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	104104926	105820728	920	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	105820759	105823898	16	0.8349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	105825578	108531282	1940	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	108535758	108536400	2	-1.2278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	108539019	110022262	709	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	110023250	110041701	33	-0.3284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	110044476	112497610	1958	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	112497716	112498764	21	-0.5153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	112498899	143553915	5245	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	143560896	143579717	5	1.1937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	143580441	147509287	1242	0.0635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	147509349	147512932	11	0.7381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	147512950	148036596	77	0.269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	148038514	150467473	1218	-0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	150467841	150469894	2	-1.2756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	150470195	150822330	238	-0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	150822391	150852902	31	-1.1455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	150853164	151026302	174	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	151028547	151035324	37	-1.6816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	151040529	194981496	29519	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	194994473	194998709	4	1.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	195005246	195067890	79	0.1834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	195067960	238458363	30023	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	238460638	238460762	6	-1.9834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	238462728	241144886	2125	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	241147028	241147170	2	-1.8048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	1	241151280	247191011	3798	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	2784	34552819	24087	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	34554898	34555239	5	-2.9576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	34562136	34571412	23	-1.6756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	34571478	34590561	17	-3.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	34590667	52597429	13043	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	52607972	52641453	41	0.3894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	52643644	87542730	22150	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	87544412	87546133	2	-1.5176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	87547340	89912071	885	0.0289
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	89938569	91228298	63	0.271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	91229082	97520697	979	0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	97523704	97528142	3	-1.4147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	97528621	106246527	5571	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	106247145	106251789	11	-2.3041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	106253687	110173879	2120	-0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	110182514	111105101	95	0.5616
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	111113237	125733056	9025	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	125734218	125747409	13	-0.523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	125748483	125992186	146	0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	125994596	125996166	2	-1.8437
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	125996862	127568491	1011	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	127573516	127574416	3	-1.6013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	127575116	129354548	1028	-0.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	129354948	129356767	14	-0.8065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	129356785	155660337	15994	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	155660916	155661175	2	-2.4857
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	2	155664655	242738129	53619	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	35345	11383063	9580	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	11387604	11388400	4	-1.4926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	11392265	13595997	1609	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	13596321	13599900	6	-0.7208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	13600765	19974799	3892	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	19978176	19978232	2	-1.5323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	19981039	26401195	4842	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	26409128	26414347	5	-1.1055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	26420977	26576104	114	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	26576764	26587170	16	-0.402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	26588205	26589989	9	0.571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	26590953	37946094	7595	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	37947798	37951119	3	-0.9699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	37951252	43476403	3588	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	43481705	43502256	10	-1.1764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	43509840	47374915	2241	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	47375335	47380455	3	-1.2881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	47384216	68828854	14311	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	68828949	68830103	14	1.1679
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	68831448	75627862	4924	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	75628512	75678936	18	0.563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	75691329	96938796	9148	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	96949570	96950800	2	1.2192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	96951370	100420474	1857	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	100427148	100431998	36	-0.3725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	100432004	110035650	5799	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	110037061	110038131	3	-1.3384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	110039014	151811322	25752	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	151814251	151814701	4	-1.8949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	151817452	152068215	127	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	152068401	152068985	2	-1.7795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	152069772	163990962	7379	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	163995351	164007552	12	0.8173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	164011324	164023184	10	-0.4331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	164028410	164098609	42	0.6818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	164106536	176563305	7662	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	176563441	176564019	5	-1.0524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	176569482	194272960	11444	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	194275881	194285253	7	-0.6826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	194285473	194360596	67	0.0786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	194360656	194361700	6	0.8076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	194363167	196032677	1110	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	196033063	196033281	3	-1.0555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	196036103	196767187	386	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	196868323	196950537	44	-0.2801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	3	196959467	199380515	1174	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	2281	61420	63	0.421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	61566	9819488	5739	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	9823258	9839018	17	0.4282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	9839048	9999220	188	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	9999813	10008453	14	-0.5834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	10009254	32033262	15450	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	32037972	32045411	6	-1.3892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	32049212	34455399	1344	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	34455420	34478602	21	0.5097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	34479145	34490685	11	0.2153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	34491954	34501120	9	0.6522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	34506267	35690807	772	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	35691376	35691913	4	-0.8015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	35693913	44700512	5862	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	44700609	44701069	3	-1.5132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	44701092	48911388	2338	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	48962541	49353369	26	0.4124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	52380456	63350429	7010	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	63352531	63354257	8	-0.8382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	63362225	64390176	578	0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	64390200	64390853	7	0.8511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	64399026	69054598	2878	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	69057536	69234339	73	-0.3775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	69378740	70424305	489	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	70424450	70425368	2	-2.1778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	70426477	119619006	29793	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	119626537	119628745	4	-1.1891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	119629830	138311689	10701	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	138311870	138314422	16	-0.7276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	138314571	173224503	21865	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	173225723	173226108	12	-1.9804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	4	173232554	191261904	12121	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	68532	795689	328	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	814016	862806	23	0.3404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	870850	886628	15	0.749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	905566	12853889	9850	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	12868780	12891533	14	-1.3827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	12902201	17863895	3338	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	17864610	17864626	2	-2.3468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	17865544	21412601	2152	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	21413596	21413610	2	-1.43
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	21421823	21485033	45	0.0734
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	21486957	21488195	5	-2.2944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	21488253	57357403	20107	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	57361784	57369272	31	1.3194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	57369290	58339315	743	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	58339383	58340327	4	-1.6636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	58340462	97070877	22182	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	97074222	97125076	43	-1.1541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	97125440	103879120	3882	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	103888272	103888503	4	-1.2685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	103888948	137833019	22167	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	137835860	137843610	17	-0.8743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	137844367	140285118	1078	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	140289200	140299744	5	-0.8925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	140300203	151494364	7516	-0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	151495579	151496981	9	-0.9727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	151498256	180311494	19311	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	180312809	180365831	18	-0.6841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	5	180365870	180722926	169	-0.0345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	94661	260197	129	0.0519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	263804	310720	64	-0.2474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	311333	2547356	1825	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	2549176	2550197	4	-1.227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	2553795	26845011	18247	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	26845417	26876548	24	-0.4706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	26881042	29945167	1437	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	29945293	29982621	20	-0.8184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	29982688	31385665	664	-0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	31388802	31404430	12	-1.7805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	31417903	32539270	501	-0.0474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	32539530	32678343	38	-1.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	32681749	32688595	9	0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	32689816	32709295	11	0.6399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	32710085	32794174	50	0.0513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	32796593	32798923	12	0.6321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	32800205	33816754	577	-0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	33817998	33818016	2	-1.3283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	33821588	49038824	9786	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	49039688	49054522	6	-0.7625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	49055149	51000687	1103	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	51001210	51001250	2	1.0606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	51007232	54039026	2208	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	54039043	54039814	8	-1.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	54043307	65393663	4351	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	65404265	65405713	2	1.4649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	65407497	74648953	6163	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	74649185	74651482	6	0.933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	74654017	77493251	1768	-0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	77496587	77509408	20	0.4336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	77509476	79019608	980	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	79025784	79091904	111	-0.6161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	79095953	103841522	15480	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	103844669	103868754	46	0.6064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	103872163	170761420	44215	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	6	170824252	170892930	4	-1.1771
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	52911	11274379	6985	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	11274393	11274631	5	-1.1621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	11277010	11882879	596	0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	11883171	11887944	7	-0.9775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	11890777	54347867	30960	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	54353999	54354011	6	-1.9218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	54360982	64206287	3137	0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	64231500	64233133	6	1.3054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	64274563	70058374	3151	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	70061186	70064077	2	2.0362
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	70066179	125832210	32565	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	125832718	125834117	18	0.716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	125840002	133429008	4697	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	133429177	133468521	47	-0.2327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	133468871	137466914	2773	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	137467272	137468165	3	-1.8056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	137474210	141406463	2408	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	141407299	141416729	11	0.2422
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	141416838	141429438	12	0.6045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	141430653	142154515	472	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	142156294	142165914	29	0.7272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	142176424	152778571	6453	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	152778578	152778645	2	-3.1176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	152778648	155156790	1784	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	155158624	155159699	2	-1.6152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	155162397	158810375	2312	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	7	158810402	158819765	12	-0.9368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	21254	585790	334	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	585875	585908	3	-1.0938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	591043	1354475	566	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	1354769	1355009	3	-1.3927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	1355095	2235234	744	0.0257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	2242045	2246765	12	-0.7497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	2257735	6801855	6025	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	6802066	6802738	6	-1.5193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	6802989	7174056	138	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	7181231	7825372	171	0.6338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	7836168	8015597	50	-0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	8027373	8055448	17	0.7766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	8091754	11986960	3230	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	12025135	12038532	6	0.9693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	12071716	12308120	52	0.1687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	12308925	12487426	60	0.5323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	12517914	15445549	2736	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	15447431	15457818	9	-1.1118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	15467641	15484957	18	0.1354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	15485254	15485581	2	-1.3755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	15485788	23458253	6512	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	23463685	23463756	4	-1.1335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	23463816	25031417	1146	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	25031487	25035904	16	-1.0911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	25039986	25040250	6	-0.3606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	25047021	39471779	9063	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	39471844	39475546	2	-1.7919
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	39475878	40891153	1091	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	40897009	40897628	2	-2.1335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	40902837	52585385	4386	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	52585658	52585776	2	-1.8033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	52586013	53007629	271	0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	53008029	53016439	3	-1.7899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	53016771	112360670	36294	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	112363455	112364436	10	1.1171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	112369457	142643421	21457	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	142644144	142645636	4	-1.38
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	8	142646255	146268959	1452	-0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	36587	5069156	5247	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	5071416	5071766	8	0.7661
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	5071852	6691145	1130	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	6691385	6698357	6	-1.0377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	6702314	22482889	13472	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	22491913	22492699	2	1.4505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	22499340	23353115	582	-0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	23353933	23363484	7	0.938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	23368488	44745084	11023	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	44746411	44777523	8	0.9685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	44780914	74470431	3652	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	74474808	74474889	2	-1.1682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	74475723	77194997	1704	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	77197241	77197981	2	-1.4644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	77202279	84566096	5406	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	84566391	84574064	9	-1.282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	9	84581506	140211215	37603	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	62759	23029166	18297	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	23029424	23031596	2	-2.074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	23032482	24415269	921	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	24417680	24418060	11	0.7743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	24418914	26727757	1627	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	26727795	26729010	2	-1.0883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	26729254	27627537	571	-0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	27633433	27637444	2	-1.853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	27647191	45632493	10101	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	45905767	46467605	89	0.7597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	46475660	46479232	13	-0.5134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	46479394	46488233	18	0.4417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	46488249	46812338	63	0.9283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	46821347	47241036	195	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	47417400	47468066	4	1.3146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	47480482	47799776	9	0.4391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	47921663	48460633	284	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	48503408	49057620	31	0.5019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	49059974	50803761	1338	-0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	50806186	51168621	15	0.4174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	51170676	51265853	50	0.0853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	51274704	51423113	10	-0.3302
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	51425004	51492405	27	0.0641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	51500366	51561926	5	-1.9689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	51573774	54778135	2429	-0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	54789031	54789527	6	-0.7754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	54789726	58880511	3014	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	58880527	58880779	3	-2.1298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	58888501	66977942	5564	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	66977957	66992932	28	0.5235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	66995459	124322286	38361	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	124324003	124341003	9	-0.7078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	10	124346802	135356694	7912	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	188510	4926943	2485	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	4928581	4933172	29	0.7882
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	4933190	5477551	544	-0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	5478727	5480169	7	-0.8585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	5481040	5740499	238	-0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	5743981	5765914	34	-0.5137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	5766037	55119916	31293	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	55130608	55217259	61	-0.4423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	55217364	65128180	5407	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	65129094	65139140	2	-1.4829
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	65145157	79645161	7873	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	79645196	79645212	2	-2.654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	79645334	95843949	11300	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	95844429	95919453	40	-0.9697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	11	95923636	134449982	27765	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	20703	8333552	5578	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	8340379	8340484	2	1.4534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	8344733	8405138	23	0.248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	8405693	9507121	591	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	9508188	9521823	10	0.2655
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	9525137	9619559	24	0.9699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	9626236	11110690	1041	-0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	11111991	11132799	12	0.6867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	11143141	31248346	14234	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	31248369	31279220	38	-0.2599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	31281907	33185927	1319	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	33192673	33199627	28	-0.6967
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	33199654	44190705	5619	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	44192107	44195804	3	-1.7293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	44199559	69158125	15198	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	69158942	69164294	9	-2.603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	69165652	71528383	1519	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	71531671	71531672	2	-1.2539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	71539459	86726093	9202	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	86727793	86786178	43	-1.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	86786964	130686668	29955	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	130698537	130708322	15	0.5653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	12	130708423	132288262	570	-0.0402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	17924949	36968044	13552	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	36968370	36986374	20	-0.5321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	36986387	49816666	8680	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	49817046	49817657	2	-1.993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	49819947	57488282	4301	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	57489080	57495031	5	-1.3414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	13	57500053	114126499	37699	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	18072124	18776758	52	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	18801410	19492423	137	0.5314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	19493212	25849482	4365	-0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	25853743	25853758	8	0.7156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	25854753	28123930	1313	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	28126661	28128796	2	-1.5006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	28131011	40678108	7944	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	40680246	40723727	13	-0.7838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	40726999	73070876	20466	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	73076460	73099653	9	0.9467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	73099668	105848388	20916	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	105854089	105873098	8	1.4691
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	14	105886988	106356482	308	0.0899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	15	18276341	19066371	153	0.0833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	15	19074991	19852286	174	-0.2557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	15	19852361	22036921	1028	-0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	15	22044109	22059801	8	-1.4487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	15	22063128	100286563	50663	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	777	12556360	9421	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	12556479	12556496	2	-1.6667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	12557748	72927032	29194	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	72937474	73009537	10	-0.7067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	73014102	86667923	12998	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	86671164	86671712	2	-1.8431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	16	86672339	88815036	846	-0.0257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	526	18299674	11431	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	18302411	18399997	24	0.7512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	18405311	36676540	9502	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	36676552	36686470	26	-0.4782
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	36686578	41564110	2539	-0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	41564451	41717786	90	-0.2418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	17	41718140	78643088	21650	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	18	1543	1713388	1174	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	18	1715758	1828112	91	-1.1497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	18	1831469	76116029	49513	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	41910	24248797	11230	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	24252658	24256797	10	-0.7799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	24279522	32836340	74	0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	32845058	32948190	28	-0.8716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	32963000	56823625	13599	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	56834164	56840009	11	-1.2263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	56846717	58420187	1094	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	58422512	58437549	17	-1.0407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	58442297	60969862	1416	-0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	60973882	60974879	5	1.1352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	19	60978105	63789666	1846	-0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	9305	1508787	1200	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	1508802	1529768	38	-0.4148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	1530092	1541893	7	-1.2586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	1545946	14719472	9914	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	14729684	14771905	69	-0.9828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	14778596	52115017	23821	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	52115237	52115335	5	-1.6467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	20	52115665	62426597	7410	-0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	21	9758742	46921385	24405	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	14432528	14482348	8	0.6863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	14482419	15875551	367	0.0741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	15879034	15879508	2	1.8346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	15879890	17150527	840	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	17161546	17190094	4	1.3016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	17190110	19795672	1628	0.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	19795835	20038030	9	1.0838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	20038108	22601745	1729	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	22613016	22674422	33	0.5387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	22680529	22726814	19	-2.2554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	22731529	37679985	10853	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	37680168	37719574	27	-0.692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	37719651	41222383	1892	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	41222526	41285375	28	0.7729
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	41285732	49313898	5944	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	49319974	49319982	5	-1.1061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	22	49320620	49581321	146	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	X	108477	150043556	82162	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	X	150044592	150046117	2	-2.0867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	X	150047213	154835548	2429	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	2710438	6161425	839	-2.7433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	6167901	6484299	128	-3.8603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	6486233	17572959	4413	-3.2579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	17577516	17679836	42	-3.6998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	17688729	17688934	3	-8.0785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	17691665	17807379	52	-3.7713
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	17809644	18080874	143	-3.1887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	18084284	19430134	649	-3.78
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	19430886	19431561	2	-7.9658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	19431797	19547685	53	-3.8539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	19547873	22289621	1060	-3.2945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	22292291	24840062	559	-3.7245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	24840296	24919963	26	-2.3429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	24920187	25846090	96	-4.2299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	25854303	26127678	90	-2.9442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	26129939	26833326	252	-3.8335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A12_896586	Y	26847504	57427647	183	-2.8463
