Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	51598	742429	45	-0.405
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	747332	25455430	14118	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	25455878	25518771	26	0.5805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	25519276	34864181	4973	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	34864225	34889148	25	-0.5665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	34890512	60610091	15548	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	60612570	60622166	4	-1.2627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	60625308	72541504	8240	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	72541524	72583736	45	-1.1469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	72584492	75822762	1930	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	75823403	75832467	6	0.7681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	75832547	81661044	3852	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	81661190	81661193	2	2.0671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	81661255	103960907	14311	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	103965022	104041212	15	0.5945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	104041509	106621221	1482	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	106623095	106623155	2	-1.2886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	106623442	108561349	1424	-0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	108563535	108618702	5	0.7238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	108630480	110036151	716	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	110036555	110041701	6	-0.753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	110044476	112497488	1960	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	112497610	112498736	21	-1.5474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	112498764	150822151	8046	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	150822330	150852862	31	2.6797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	150852902	150853218	4	0.8949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	150857118	151023162	167	-0.0239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	151023398	151035324	41	0.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	151040529	167483561	11338	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	167500598	167522026	10	0.5261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	167523125	173063956	3530	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	173064008	173064071	2	1.4444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	173064128	187914780	9928	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	187915106	187915150	2	-1.906
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	187918670	191422415	2337	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	191422902	191422955	3	1.2293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	191422971	195057666	2472	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	195065188	195065782	7	0.8666
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	195065911	241920819	32588	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	241927547	241927684	5	-1.094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	1	241929731	247191011	3389	0.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	2784	57255548	40605	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	57255666	57298975	68	0.8731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	57300902	153495731	54454	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	153504314	153505030	3	-1.9198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	153508815	159418942	3450	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	159421882	159434736	5	-0.9003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	159438339	165560134	3591	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	165562220	165572295	5	-0.967
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	165573685	208063200	25740	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	208063423	208067581	16	-2.883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	208067721	229467723	13895	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	229467890	229473627	14	0.4611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	2	229474267	242738129	8228	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	35345	5364179	4731	0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	5365237	5411077	36	-0.9339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	5411289	61629229	37600	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	61633955	61693625	45	-0.9236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	61699222	65163493	2983	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	65164275	65185492	53	-0.6176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	65191389	68828854	2424	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	68828949	68830103	14	-1.1815
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	68831448	75651239	4939	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	75655239	75695864	10	0.9376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	75698129	84184912	4691	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	84188123	84188856	2	-2.9398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	84193657	163606060	45176	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	163620294	163625399	14	-0.7083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	163626942	164015644	276	0.0502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	164017424	164023167	5	1.9438
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	164023184	194357441	19249	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	194360596	194365597	20	0.9992
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	194369129	196875861	1489	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	196884256	196960434	45	-0.372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	3	196964365	199380515	1173	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	2281	9066075	5248	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	9070328	9088443	9	-1.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	9095185	9819488	546	0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	9823258	9844264	34	1.2284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	9844280	10001452	174	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	10002252	10009766	15	-1.9888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	10011816	34455449	16813	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	34462895	34500578	37	-0.2664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	34501120	34506267	2	-1.5469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	34506308	47899056	8545	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	47899393	47899405	2	-1.3654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	47900699	48962605	438	0.0274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	48985949	48986112	2	-2.2826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	48991977	104965020	32003	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	104971079	104971086	5	1.2383
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	104971093	115393149	6311	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	115394772	115403715	26	0.5051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	115403759	151017444	21082	0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	151022784	151024176	2	-1.4434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	151026049	156021998	3033	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	156022455	156022528	3	-2.7308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	156022649	185287623	19100	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	185294567	185297716	3	1.7176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	4	185300448	191261904	4062	0.0213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	68532	738748	308	0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	751371	853686	35	0.8015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	853839	12872313	9882	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	12872375	12891533	11	-1.0657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	12902201	46306865	20581	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	46307687	46309259	6	-2.4702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	46313969	123174109	45124	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	123174343	123174425	2	-2.0564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	123174749	177131055	35191	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	177160157	177165211	3	2.4667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	5	177187571	180722926	2003	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	94661	8870345	7218	0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	8872510	8872511	2	-1.548
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	8873967	29945051	14520	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	29945166	29982787	24	0.8699
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	29984938	32695435	1229	0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	32700999	32710085	7	-1.1171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	32710247	32798005	57	0.1973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	32798775	32798790	2	2.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	32798808	74648586	24230	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	74648953	74658138	10	0.8862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	74660283	79019300	2765	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	79019345	79091893	114	-0.4205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	79091904	134307961	34625	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	134310764	134311325	2	-2.0652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	6	134313765	170892930	25157	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	52911	38250724	27439	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	38252730	38307187	77	-0.2342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	38307556	54347867	11066	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	54353999	54354011	6	-1.8853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	54360982	70058374	6296	0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	70061186	70064077	2	-2.0556
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	70066179	109221034	22508	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	109224328	109224909	10	-0.7143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	109224911	109224916	3	0.1101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	109224993	109241146	22	-1.2152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	109241218	125832792	10042	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	125832887	125833851	10	1.1423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	125834112	133435717	4705	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	133435735	133440983	24	0.4777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	133446174	141409593	5210	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	141416112	141417001	10	-1.2729
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	141417096	141427982	4	-4.5183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	141428244	141445586	32	-1.7381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	141445629	142156294	448	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	142156339	142159298	7	-3.3571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	142159383	142165614	19	-1.7097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	142165684	142929090	472	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	142933203	143163931	90	-0.2569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	143174784	152981645	6089	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	152982789	153013356	26	0.4678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	153026405	154596325	1228	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	154597447	154597941	11	-0.5034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	7	154598038	158819765	2664	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	21254	3774468	3438	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	3774491	3777514	23	-0.6404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	3778626	4153141	697	0.043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	4153431	4153446	3	-1.0964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	4153475	5586143	1934	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	5586172	5591708	23	-0.4994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	5591735	7869055	1891	0.0305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	7869464	7973265	22	-0.8053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	7980592	18309434	8721	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	18310437	18315465	4	-1.6473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	18315667	25028104	5090	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	25030360	25040140	25	0.5883
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	25040167	40891153	10170	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	40897009	40897628	2	-1.7308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	40902837	112364214	40992	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	112364257	112364436	4	-2.3414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	112369457	143222551	21864	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	143223790	143232724	3	1.3108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	8	143233785	146268959	1070	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	36587	23351805	20459	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	23353115	23363484	8	0.8391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	23368488	25589860	1621	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	25589963	25590655	2	-1.5792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	25593763	27789231	1658	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	27789950	27798093	10	-0.9341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	27799668	28299878	487	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	28300570	28301629	2	1.7978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	28302061	44344908	7220	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	44364447	44729459	27	-0.9374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	44735315	68782816	297	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	68795766	69096836	27	-0.4176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	69100250	71998782	1583	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	72000806	72002574	2	-3.632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	9	72003501	140211215	46530	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	62759	4280814	3587	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	4280838	4280924	2	1.7982
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	4281016	46111486	27998	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	46337321	46352201	4	-2.5949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	46363383	66976282	13158	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	66977929	66984452	28	-1.6407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	66992801	80921337	9247	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	80953273	81184196	16	-0.5508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	81229407	89028321	5224	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	89036478	89059776	2	1.8538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	89060725	90952244	1416	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	90952259	90952401	2	1.2083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	90953068	94624201	2278	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	94626259	94626347	2	-1.3659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	94630857	124333941	20216	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	124334099	124341003	6	-0.9399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	10	124346802	135356694	7923	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	188510	5750159	3317	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	5750821	5765715	22	0.4233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	5765914	12286497	4968	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	12293888	12293899	2	-2.0596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	12295385	33287825	14833	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	33289276	33294003	3	1.2631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	33294209	42918407	7011	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	42926160	42927401	4	0.9144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	42927616	49715563	3754	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	49716131	49717264	6	-1.0888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	49722737	54722184	544	0.0321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	54726437	54738787	5	-0.9051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	54766051	55132599	208	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	55132812	55203813	49	-0.4099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	55203908	79645161	13308	-0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	79645196	79645212	2	-2.6951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	79645334	84164365	3268	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	84164651	84170883	2	1.5986
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	84171525	91470137	4813	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	91470306	91470691	2	1.8708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	91472352	106743866	11084	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	106743881	106744338	6	-1.7926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	11	106757572	134449982	19966	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	20703	736231	418	0.0507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	739370	743765	16	-0.7756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	744205	33278024	22522	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	33280096	33286409	4	-3.4462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	33286685	34141963	540	0.0299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	34147976	34166673	12	-1.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	34167061	41534170	3424	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	41534384	41535152	3	1.4741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	41536624	44192107	1599	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	44195007	44195804	2	-2.7698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	44199559	71528383	16732	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	71531671	71531672	2	1.9894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	71539459	110794461	25013	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	110797506	110806134	4	1.0271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	12	110807360	132288262	14808	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	17924949	22527210	2900	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	22530678	22531515	12	-2.1363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	22536195	26640853	3154	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	26641080	26644711	2	1.4279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	26647358	31430121	3578	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	31430622	31436408	17	-2.1755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	31436423	50443055	13052	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	50444912	50447199	2	1.853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	50447558	56610801	3402	0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	56611229	56676381	46	-0.4991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	56687715	69631450	7887	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	69631804	69670395	49	-0.9642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	13	69670767	114126499	30226	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	18072124	18472242	26	-0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	18486191	18539520	12	0.7151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	18611714	18763249	12	-0.5933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	18767885	84635179	41906	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	84635226	84635553	3	1.1808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	84635717	105361956	13124	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	105362026	105374042	7	0.7099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	105374087	105822329	177	0.0377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	105824904	105824912	3	1.8013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	105825048	105950876	56	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	105952397	106005329	56	-0.4508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	106005593	106224218	128	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	106231370	106250892	21	-0.3147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	14	106255229	106356482	69	0.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	18276341	19080081	155	-0.0584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	19080173	19103576	4	0.9092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	19107947	19438545	121	-0.1623
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	19451059	19452665	2	-1.8946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	19456767	32458604	7528	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	32459378	32643110	80	-0.5772
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	32645302	45306411	7635	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	45306837	45306846	2	1.4866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	45312953	90566759	29095	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	90566878	90567298	3	1.5845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	15	90567762	100286563	7448	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	777	18089485	12801	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	18106218	18145790	3	1.3579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	18150227	18514179	18	0.097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	18534802	18540917	4	0.6968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	18543305	19851864	704	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	19853151	19874863	29	0.3456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	19877755	28655035	5430	-0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	28660952	28732153	4	1.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	28732372	32054387	1106	-0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	32066353	32563024	98	0.3416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	32650790	33277265	61	0.0542
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	33279107	33681473	99	0.3371
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	33683586	52967344	5746	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	52967442	52977133	18	-0.6407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	52978199	54354095	1211	-0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	54355723	54356280	3	2.414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	16	54361849	88815036	25188	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	526	611794	337	0.0374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	613993	614127	2	1.4086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	625241	4486107	2103	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	4487026	4491080	4	-0.9271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	4491215	16680995	8077	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	16682240	16682253	2	-1.4219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	16682509	18260587	919	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	18296117	18399997	27	-1.3723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	18405311	36676616	9513	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	36676629	36684057	19	1.3533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	36686250	41506609	2503	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	41507608	41719947	135	0.265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	41750187	42107462	47	-0.4994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	42107479	51514043	5813	-0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	51515913	51527590	27	-0.8772
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	17	51527822	78643088	15782	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	18	1543	36514418	22847	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	18	36514432	36519387	18	-1.783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	18	36522022	38305676	1215	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	18	38310567	38311765	25	-0.4067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	18	38312393	76116029	26721	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	19	41910	63789666	29362	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	9305	17408	20	-0.0522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	18331	21546	3	1.3237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	22347	1529768	1217	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	1530092	1541893	7	-1.1413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	1545946	12577226	8446	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	12577565	12577594	2	-1.4571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	12577981	14719472	1471	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	14729684	14771472	64	-0.7085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	20	14771693	62426597	31270	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	21	9758742	24048609	7607	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	21	24048652	24048660	2	1.6777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	21	24048953	46921385	16801	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	22	14432528	18707355	2148	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	22	18710744	18871884	5	-1.0668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	22	18879111	41229384	15280	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	22	41234550	41264406	20	0.4954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	22	41272906	49581321	6111	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	X	108477	32208607	20000	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	X	32208628	32209246	2	-4.9477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	X	32210525	47559431	9006	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	X	47559847	47566967	5	-4.6467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	X	47568768	154835548	55518	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	Y	2710438	24803050	7925	-0.8916
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	Y	24811102	25185903	82	-0.5569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	Y	25211715	25633709	50	-0.9418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	Y	25649572	25986607	58	-0.6166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B01_896520	Y	25989677	57427647	475	-0.9044
