Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	51598	16021930	8419	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	16022502	16026512	7	1.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	16026788	72522941	34539	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	72528701	72535958	9	-0.9788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	72541006	72583721	47	1.3085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	72583736	74963370	1447	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	74965623	74972372	4	1.0909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	74976171	81661044	4338	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	81661190	81661193	2	1.8109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	81661255	108712268	17290	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	108729983	108787720	11	-0.641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	108815431	110041678	657	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110041701	110052095	11	-0.6112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110052107	110052113	2	1.684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110052665	110054653	8	-1.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110058147	112491849	1939	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	112497488	112498736	22	-1.3913
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	112498764	119910636	4732	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	119910783	119951040	54	0.318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	119952206	146851961	1559	-0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	146894193	146894466	3	-1.5193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	146903393	147220620	35	-0.063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	147291426	147558223	141	-0.5602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	147572692	150822151	1518	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	150822330	150852862	31	1.7958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	150852902	178959605	19035	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	178968778	178973547	8	-0.9026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	178981037	191422415	8315	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	191422902	191422971	4	1.5338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	191426346	195007939	2416	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	195007990	195089940	83	-0.2789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	195090236	247191011	35958	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	2784	4183562	2988	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	4191739	4201387	37	-0.702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	4201442	40844166	25778	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	40844256	40844942	2	2.0667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	40845310	52607972	8398	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	52607984	52634830	32	0.5462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	52634878	86791198	21957	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	86806581	86807365	2	-2.1017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	86823917	134767997	24369	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	134772954	134773340	3	2.0488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	134774727	146578555	7328	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	146580874	146583404	24	-1.7147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	146594276	208063200	36996	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	208063423	208067394	15	-0.8152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	208067581	242738129	22136	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	35345	1756803	1554	0.0301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	1757524	1762581	6	-1.1026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	1764158	84539301	56132	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84540326	84771824	128	-0.9175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84772279	84789755	29	-0.1784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84794415	85013758	141	-0.8664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	85016387	126918927	22162	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	126926298	126935927	9	0.7419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	126941452	134507557	4654	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	134507572	134507587	2	1.8411
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	134507702	157962381	14453	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	157962957	157966662	6	-1.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	157969693	162998291	3019	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	162998321	162998343	2	1.4856
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	162998638	163995786	680	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	163995843	164108689	67	-0.9742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	164109266	166519938	1315	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	166523258	166564633	67	-0.8393
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	166568123	189077988	13982	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	189078072	189078407	2	2.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	189078434	194090444	3637	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	194090667	194091319	8	0.6802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	194091799	196907473	1704	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	196914788	196960434	37	0.3566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	196964365	199380515	1173	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	2281	9819488	5803	-0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	9832514	9840596	28	-1.8796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	9843312	9843364	2	1.9849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	9843706	68967186	36524	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	68970733	68970737	3	-1.5641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	68977394	69475459	89	-0.1186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69477123	69512426	3	1.8893
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69571393	104965020	21415	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	104971079	104971086	5	1.5911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	104971093	108287862	1880	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	108290968	108291337	4	1.2693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	108292956	173224503	39598	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173225723	173237396	16	0.7249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173238406	173659097	228	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173661522	173665218	7	1.3697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173677707	190426037	11497	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	190432112	190436258	4	-2.58
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	190436765	191261904	386	-0.0404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	68532	12838262	10220	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	12843869	12872313	7	0.773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	12872375	12891533	11	-1.3566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	12902201	104232981	52852	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	104233164	104271117	34	-0.9298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	104280080	155409498	33180	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	155409576	155415307	12	-0.753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	155427828	173139959	12425	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	173141214	173141492	2	1.5528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	173141606	175392693	1672	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	175398295	175402113	2	-2.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	175402930	180722926	2734	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	94661	29958359	21761	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	29979615	30009555	17	-0.7753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	30016448	31388802	652	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	31394255	31403932	8	1.1472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	31403966	32560907	511	0.0711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32562253	32609277	16	1.143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32616454	32794174	86	0.1286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32796593	32798808	11	0.922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32798923	54039043	13701	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	54039110	54039814	7	1.1795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	54043307	74648953	10525	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	74649185	74658138	9	-2.243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	74660283	77071668	1470	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77073620	77073646	3	1.6787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77073713	77496813	299	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77497537	77509101	12	-0.6502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77509111	79028521	991	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	79028553	79103380	113	0.3295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	79108333	87425087	5192	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	87425327	87428504	2	-1.9315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	87442867	103841522	10286	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	103844669	103868754	46	0.7642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	103872163	118778310	9242	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	118778379	118780237	2	-1.9833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	118788984	125314171	4012	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	125316038	125318507	2	-2.3779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	125319610	170892930	30992	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	52911	10747016	6614	0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	10758675	10772633	13	-0.6355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	10774210	22401305	9479	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	22401997	22403012	2	-2.529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	22405279	91195805	40877	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	91196230	91196969	7	1.1877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	91197272	133435717	25192	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	133435735	133448607	30	0.4447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	133448649	141416112	5205	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	141416149	141438377	40	-0.6235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	141438576	142154515	452	0.0512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	142156294	142176424	30	0.7536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	142186163	154020828	7328	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	154024104	154030546	4	-1.5505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	154031763	156165822	1657	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	156167444	156185837	10	-0.5603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	156186967	157810356	939	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	157821349	157824926	2	1.9087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	157829747	158819765	639	-0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	21254	5586758	6105	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	5588710	5588726	2	2.0674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	5588746	7202929	1732	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	7203136	7864332	171	0.3204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	7864777	14553939	5372	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	14554403	14554432	2	-1.7472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	14554445	31024654	12595	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	31025644	31027127	2	-1.7094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	31027370	112363846	47056	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	112364214	112364436	5	1.5842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	112369457	146268959	22934	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	36587	24493816	21261	0.0146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	24494125	24507682	19	-3.3129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	24509684	28299878	2963	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	28300570	28301629	2	1.8408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	28302061	43602904	7156	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	43603159	44201941	57	-0.5727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	44205408	44745084	38	-0.117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	44746411	44815938	13	0.7591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	44828123	92649398	16662	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	92649489	92649953	3	1.4225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	92652780	117892505	17984	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	117895045	117899204	6	1.0238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	117900428	118566442	528	0.0269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	118566499	118566566	2	1.7903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	118566801	140211215	13236	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	62759	4280814	3587	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	4280838	4280924	2	2.0725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	4281016	17967560	11296	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	17978214	17989863	2	2.1539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	18011822	24412311	4355	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	24412763	24419045	17	0.6235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	24420666	46475660	12406	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	46475717	46479679	17	0.5708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	46479752	47016136	85	0.1205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47016329	47170269	170	0.4923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47170311	47417400	17	-0.0619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47432905	47468066	3	1.2758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47480482	48356772	290	0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	48391956	48460633	3	1.9709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	48503408	51500366	1472	-0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	51510990	51527225	2	-2.4332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	51537240	66976085	11020	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	66976164	66992932	32	0.5504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	66995459	90928421	15867	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	90928653	90940074	14	-0.7335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	90940386	132356366	28607	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	132357233	132382825	14	0.4959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	132382910	135356694	1821	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	188510	18905648	12766	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	18905685	18917673	38	-0.3836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	18917754	21803470	2618	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	21804082	21805328	5	-2.8167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	21807233	55116036	19235	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	55116094	55232215	81	0.2941
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	55232377	84164365	16556	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	84164651	84170883	2	1.7935
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	84171525	85567306	925	0.027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	85567596	85575873	14	-0.8349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	85576365	87300267	1252	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	87301650	87302071	2	-1.8022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	87302086	91470137	2620	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	91470306	91470691	2	2.249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	91472352	101099594	7268	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	101103070	101103174	4	1.1962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	101103422	133322682	22940	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	133322866	133323307	2	1.8178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	133324652	134449982	840	0.0363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	20703	9521823	6207	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	9525137	9619559	24	-1.3599
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	9626236	10471727	635	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	10474634	10487073	5	-1.2232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	10487987	11104058	400	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11105412	11132799	16	0.6523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11143141	11395358	132	0.1121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11402844	11444019	35	-0.6488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11444049	24811848	9121	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	24811933	24819426	7	0.828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	24819845	27534773	2096	0.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	27537253	27542629	30	-0.654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	27548428	65243372	22201	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	65243521	65244151	2	1.8801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	65249564	84948866	12636	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	84952927	84956674	3	-1.4009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	84962559	89007481	2281	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	89015800	89016205	7	-1.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	89017688	91047874	1364	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	91047922	91050760	2	-1.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	91055739	98518469	5249	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	98519837	98532030	11	-1.0844
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	98532452	100865003	1444	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	100866032	100866250	3	-1.5866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	100867083	125691333	16207	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	125691697	125696445	2	1.9851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	125696993	125878437	155	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	125878839	125880958	6	-1.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	125883241	129078885	2885	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	129085308	129085617	2	1.845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	129085763	132288262	1927	0.0269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	17924949	23528915	3682	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	23530140	23531050	4	-1.2319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	23533254	50443055	19025	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	50444912	50447199	2	2.7582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	50447558	114126499	41609	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	18072124	19045977	72	0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	19080913	19495349	120	0.4046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	19495700	36405621	11021	0.0227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	36406273	36406386	3	1.6725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	36406723	39678679	1896	0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	39683673	39686670	2	-2.3139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	39687916	39721894	26	0.1267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	39722998	39726067	3	-1.1024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	39726469	40680246	693	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40680440	40726999	13	-0.8495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40727099	73070876	20488	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	73076460	73099668	10	0.8463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	73100484	99226524	17941	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	99227544	99230133	2	1.5154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	99232130	105609107	2876	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	105612798	105638145	13	1.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	105640508	106356482	417	0.1068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	18276341	19055354	152	0.0974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	19066371	20088838	269	0.5611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	20224763	100286563	51650	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	777	6952473	4343	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	6953201	6953569	2	2.4072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	6955771	16475701	7451	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	16492765	16646764	25	0.6529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	16646939	76929109	30039	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	76929941	76942239	15	-1.8592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	76942266	88815036	10644	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	526	41575332	23558	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	41577915	42107462	130	-0.3837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	42107479	51514043	5813	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	51515913	51527822	28	-0.8928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	51528246	76243458	14812	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	76244388	76248774	2	2.4302
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	76248895	78643088	963	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	18	1543	76116029	50820	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	41910	46044577	19650	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	46048840	46072786	31	-0.5412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	46083995	58104943	6169	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	58107981	58115832	2	1.9448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	58122979	60018425	1194	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	60022466	60055336	15	-0.8058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	60055708	63789666	2297	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	9305	58998640	40709	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	59002420	59023596	49	0.5073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	59023879	62426597	1747	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	9758742	45835770	23756	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	45837037	45839940	4	1.2601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	45841265	46921385	651	0.0313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	14432528	37681412	15513	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	37693565	37701848	21	-0.5898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	37704323	49581321	8030	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	108477	34496770	21705	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	34499522	34499821	2	-4.7957
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	34505643	154835548	62821	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	Y	2710438	57427647	8590	-0.8961
