Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	61735	16149343	8419	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	16149915	16153925	7	1.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	16154201	72750353	34617	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	72756113	72763370	9	-0.9788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	72768418	72811133	47	1.3085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	72811148	75190782	1447	0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	75193035	75199784	4	1.0909
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	75203583	81888456	4337	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	81888602	81888605	2	1.8109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	81888667	105622533	15028	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	105622940	105623553	2	1.5072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	105626818	108910745	2252	0.0146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	108928460	108986197	11	-0.641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	109013908	110240155	657	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110240178	110250572	11	-0.6112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110250584	110250590	2	1.684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110251142	110253130	8	-1.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	110256624	112690326	1939	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	112695965	112697213	22	-1.3913
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	112697241	120109113	4731	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	120109260	120149517	54	0.318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	120150683	148585337	1556	-0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	148627569	148627842	3	-1.5193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	148636769	148953996	35	-0.063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	149024802	149291599	141	-0.5602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	149306068	152555527	1519	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	152555706	152586238	31	1.7958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	152586278	180692982	19034	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	180702155	180706924	8	-0.9026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	180714414	193155792	8315	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	193156279	193156348	4	1.5338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	193159723	196741316	2416	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	196741367	196823317	83	-0.2789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	196823613	249224388	35956	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	12784	4205687	2988	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	4213864	4223512	37	-0.702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	4223567	40990662	25776	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	40990752	40991438	2	2.0667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	40991806	52754468	8397	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	52754480	52781326	32	0.5462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	52781374	86937687	21952	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	86953070	86953854	2	-2.1017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	86970406	135051527	24363	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	135056484	135056870	3	2.0488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	135058257	146862085	7327	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	146864404	146866934	24	-1.7147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	146877806	208354955	36999	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	208355178	208359149	15	-0.8152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	208359336	243089456	22136	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	60345	1781803	1553	0.0301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	1782524	1787581	6	-1.1026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	1789158	84456611	56129	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84457636	84689134	128	-0.9175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84689589	84707065	29	-0.1784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84711725	84931068	141	-0.8664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84933697	125436237	22159	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	125443608	125453237	9	0.7419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	125458762	133024867	4654	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	133024882	133024897	2	1.8411
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	133025012	156479687	14453	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	156480263	156483968	6	-1.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	156486999	161515597	3018	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	161515627	161515649	2	1.4856
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	161515944	162513092	680	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	162513149	162625995	67	-0.9742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	162626572	165037244	1314	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	165040564	165081939	67	-0.8393
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	165085429	187595294	13984	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	187595378	187595713	2	2.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	187595740	192607750	3637	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	192607973	192608625	8	0.6802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	192609105	195422293	1704	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	195429608	195474763	37	0.3566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	195478694	197896118	1173	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	12281	10210390	5803	-0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	10223416	10231498	28	-1.8796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	10234214	10234266	2	1.9849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	10234608	69284591	36523	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69288138	69288142	3	-1.5641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69294799	69338564	11	0.7487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69344612	69375348	9	0.258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69390292	69484109	59	-0.2916
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	69485840	104745571	21432	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	104751630	104751637	5	1.5911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	104751644	108068413	1880	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	108071519	108071888	4	1.2693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	108073507	172987928	39602	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	172989148	173000821	16	0.7249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173001831	173422522	228	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173424947	173428643	7	1.3697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	173441132	190189043	11496	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	190195118	190199264	4	-2.58
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	190199771	191027923	386	-0.0404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	15532	12785262	10222	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	12790869	12819313	7	0.773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	12819375	12838533	11	-1.3566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	12849201	104205082	52850	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	104205265	104243218	34	-0.9298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	104252181	155476920	33179	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	155476998	155482729	12	-0.753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	155495250	173207353	12426	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	173208608	173208886	2	1.5528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	173209000	175460087	1673	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	175465689	175469507	2	-2.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	175470324	180790320	2734	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	149661	29850380	21760	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	29871636	29901576	17	-0.7753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	29908469	31280823	652	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	31286276	31295953	8	1.1472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	31295987	32452929	511	0.0711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32454275	32501299	16	1.143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32508476	32686196	88	0.131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32688615	32690830	11	0.922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	32692227	53931084	13700	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	53931151	53931855	7	1.1795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	53935348	74592225	10525	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	74592457	74601410	9	-2.243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	74603555	77014948	1470	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77016900	77016926	3	1.6787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77016993	77440094	299	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77440818	77452382	12	-0.6502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	77452392	78971802	991	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	78971834	79046661	113	0.3295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	79051614	87368368	5191	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	87368608	87371785	2	-1.9315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	87386148	103734829	10286	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	103737976	103762061	46	0.7642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	103765470	118671617	9244	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	118671686	118673544	2	-1.9833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	118682291	125272472	4014	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	125274339	125276808	2	-2.3779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	125277911	171051005	30995	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	43355	10780491	6613	0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	10792150	10806108	13	-0.6355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	10807685	22434780	9480	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	22435472	22436487	2	-2.529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	22438754	91357869	40876	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	91358294	91359033	7	1.1877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	91359336	133785177	25197	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	133785195	133798067	30	0.4447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	133798109	141769643	5205	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	141769680	141791908	40	-0.6235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	141792107	142474939	452	0.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	142476719	142486345	29	0.7663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	142486495	154389895	7328	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	154393171	154399613	4	-1.5505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	154400830	156473061	1657	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	156474683	156493076	10	-0.5603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	156494206	158117595	939	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	158128588	158132165	2	1.9087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	158136986	159127004	639	-0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	31254	5599350	6106	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	5601302	5601318	2	2.0674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	5601338	7215519	1732	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	7215726	7826922	171	0.3204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	7827367	14509568	5371	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	14510032	14510061	2	-1.7472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	14510074	30905112	12596	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	30906102	30907585	2	-1.7094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	30907828	112294670	47060	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	112295038	112295260	5	1.5842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	112300281	146298155	22936	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	46587	24503816	21264	0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	24504125	24517682	19	-3.3129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	24519684	28309878	2963	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	28310570	28311629	2	1.8408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	28312061	43662908	7161	0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	43663163	44261945	57	-0.5727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	44265412	44805088	38	-0.117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	44806415	44875942	13	0.7591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	44888127	93609577	16664	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	93609668	93610132	3	1.4225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	93612959	118852684	17988	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	118855224	118859383	6	1.0238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	118860607	119526621	528	0.0269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	119526678	119526745	2	1.7903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	119526980	141091394	13237	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	72759	4290814	3587	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	4290838	4290924	2	2.0725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	4291016	17927554	11296	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	17938208	17949857	2	2.1539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	17971816	24372305	4354	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	24372757	24379039	17	0.6235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	24380660	47055654	12406	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47055711	47059673	17	0.5708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47059746	47546130	85	0.1205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47546323	47700263	170	0.4923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47700305	47897394	17	-0.0619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47912899	47948060	3	1.2758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	47960476	48736766	290	0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	48771950	48840627	3	1.9709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	48883402	51830360	1473	-0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	51840984	51857219	2	-2.4332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	51867234	67306079	11019	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	67306158	67322926	32	0.5504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	67325453	90938441	15867	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	90938673	90950094	14	-0.7335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	90950406	132466376	28605	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	132467243	132492835	14	0.4959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	132492920	135506704	1821	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	198510	18949072	12765	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	18949109	18961097	38	-0.3836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	18961178	21846894	2617	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	21847506	21848752	5	-2.8167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	21850657	55359460	19233	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	55359518	55475639	81	0.2941
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	55475801	84486717	16556	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	84487003	84493235	2	1.7935
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	84493877	85889658	925	0.027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	85889948	85898225	14	-0.8349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	85898717	87622619	1252	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	87624002	87624423	2	-1.8022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	87624438	91830489	2619	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	91830658	91831043	2	2.249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	91832704	101594384	7266	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	101597860	101597964	4	1.1962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	101598212	133817472	22936	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	133817656	133818097	2	1.8178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	133819442	134944770	840	0.0363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	150442	9630556	6206	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	9633870	9728292	25	-1.3147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	9734969	10580460	635	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	10583367	10595806	5	-1.2232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	10596720	11212791	399	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11214145	11241532	16	0.6523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11251874	11504091	132	0.1121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11511577	11552752	35	-0.6488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	11552782	24920581	9120	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	24920666	24928159	7	0.828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	24928578	27643506	2095	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	27645986	27651362	30	-0.654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	27657161	66957105	22198	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	66957254	66957884	2	1.8801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	66963297	86424735	12636	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	86428796	86432543	3	-1.4009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	86438428	90483350	2281	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	90491669	90492074	7	-1.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	90493557	92523743	1364	0.0188
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	92523791	92526629	2	-1.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	92531608	99994338	5249	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	99995706	100007899	11	-1.0844
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	100008321	102340872	1443	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	102341901	102342119	3	-1.5866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	102342952	127125380	16206	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	127125744	127130492	2	1.9851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	127131040	127312484	155	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	127312886	127315005	6	-1.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	127317288	130512932	2885	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	130519355	130519664	2	1.845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	130519810	133778189	1927	0.0269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	19026949	24630915	3682	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	24632140	24633050	4	-1.2319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	24635254	51545054	19023	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	51546911	51549198	2	2.7582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	51549557	115108397	41607	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	19002124	19975977	72	0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	20010913	20425509	120	0.4046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	20425860	37335870	11020	0.0226
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	37336522	37336635	3	1.6725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	37336972	40608928	1895	0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40613922	40616919	2	-2.3139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40618165	40652144	26	0.1267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40653248	40656317	3	-1.1024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40656719	41610496	693	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	41610690	41657249	13	-0.8495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	41657349	74001123	20486	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	74006707	74029915	10	0.8463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	74030731	100156771	17942	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	100157791	100160380	2	1.5154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	100162377	106538062	2876	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	106541753	106567100	13	1.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	106569463	107285437	417	0.1068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	20016328	20795340	152	0.0974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	20806357	22587474	269	0.5611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	22673399	102469040	51647	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	60777	7012472	4342	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	7013200	7013568	2	2.4072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	7015770	16568200	7451	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	16585264	16739263	25	0.6529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	16739438	78371608	29956	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	78372440	78384738	15	-1.8592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	78384765	90287535	10647	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	526	44219555	23557	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	44222138	44752283	130	-0.3837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	44752300	54159044	5815	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	54160914	54172823	28	-0.8928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	54173247	78628863	14811	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	78629793	78634179	2	2.4302
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	78634300	81049726	963	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	18	11543	78015057	50817	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	90910	41352737	19649	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	41357000	41380946	31	-0.5412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	41392155	53413131	6169	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	53416169	53424020	2	1.9448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	53431167	55326613	1194	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	55330654	55363524	15	-0.8058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	55363896	59097854	2297	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	61305	59565245	40712	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	59569025	59590201	49	0.5073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	59590484	62956153	1747	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	10736871	47011342	23756	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	47012609	47015512	4	1.2601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	47016837	48096957	650	0.0315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	16052528	39351466	15512	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	39363619	39371902	21	-0.5898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	39374377	51234455	8031	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	168477	34586849	21706	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	34589601	34589900	2	-4.7957
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	34595722	155182354	62808	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	Y	2650438	59018259	8635	-0.8971
