Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	3218610	180692982	86675	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	180702155	180706924	8	-0.9026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	1	180714414	247813706	42419	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	484222	133450753	68659	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	133451149	133452455	2	-1.6711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	133454279	207709877	41558	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	207711068	207711082	2	-1.7635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	2	207714951	242476062	21010	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	2212571	84456611	48097	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84457636	84931068	212	-0.8722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	84933697	156479687	37269	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	156480263	156483968	6	-1.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	3	156486999	197538677	20764	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	4	1053934	188763651	102706	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	914233	104205082	54656	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	104205265	104243218	34	-0.9298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	5	104252181	180360469	45788	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	1014281	87368368	47637	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	87368608	87371785	2	-1.9315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	87386148	125272472	21263	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	125274339	125276808	2	-2.3779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	6	125277911	170903919	27549	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	7	705284	158385118	81296	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	617667	30905112	17998	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	30906102	30907585	2	-1.7094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	8	30907828	145232496	63516	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	9	789932	140938752	68010	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	10	415240	135225087	80833	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	456120	87622619	47069	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	87624002	87624423	2	-1.8022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	11	87624438	134142530	30157	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	889902	92523743	50420	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	92523791	92526629	2	-1.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	92531608	126147178	20490	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	126147208	126149641	3	-1.1233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	12	126150038	133161346	3006	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	13	19450806	114987458	56624	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	20501368	40652144	10871	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40653248	40656317	3	-1.1024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	40656719	100156771	35968	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	100157791	100160380	2	1.5154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	14	100162377	105988038	2581	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	23687685	70520077	26611	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	70524507	70525379	3	-1.4094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	15	70529197	101884307	17900	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	16	653459	89379936	40783	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	17	987221	80917016	36980	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	18	329586	77109240	42644	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	284018	11163601	3728	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	11163689	11169052	3	-1.2552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	19	11177408	58878226	20215	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	20	455764	62219837	37280	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	21	15347621	47678774	20578	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	22	17423930	49331012	16919	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B02_896604	X	3157107	154905589	63716	0.0084
