Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	1	3208470	12551975	5196	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	1	12555758	12556621	2	-1.2046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	1	12556772	38479052	13416	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	1	38479226	38484219	2	-2.0485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	1	38486066	245880329	110404	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	2	474222	159494186	83705	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	2	159495699	159496039	2	-2.5732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	2	159496100	242124735	47513	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	3	526235	199023074	106325	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	4	1043934	189836143	102679	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	5	967233	180293075	100454	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	959281	24478937	16444	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	24481349	24491945	9	0.6247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	24492612	50224661	12991	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	50224919	50225031	2	-1.5664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	50229543	72209811	9667	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	72211053	72211707	2	-1.5394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	72211748	145128324	41951	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	145130807	145131454	4	-1.1073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	6	145136230	170745844	15348	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	7	671810	158077879	81279	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	8	607667	145304484	81490	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	9	779932	10532631	5776	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	9	10532652	10537558	12	0.4572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	9	10537648	140058573	62199	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	10	405240	135075077	80830	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	11	446120	133647740	77214	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	12	760163	82701481	45686	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	12	82704870	82704886	2	-1.3838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	12	82705140	131671419	28227	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	13	18348806	85529880	38761	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	13	85530543	85541721	11	0.6582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	13	85544761	114005560	17853	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	14	19571208	105059083	49420	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	15	21238778	51704705	15839	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	15	51705219	51781785	57	-1.2268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	15	51785260	99701830	28619	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	16	593460	87907437	40843	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	17	933971	78510305	36968	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	18	319586	25838535	13485	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	18	25841097	25855733	10	-1.0287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	18	25861684	75210228	29144	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	19	235018	63570038	23938	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	20	403764	61690281	37263	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	21	14269492	46503202	20576	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	22	15803930	27895788	4576	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	22	27896978	27897431	2	-1.6825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	22	27898963	47717016	12337	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B03_896450	X	3167107	154558783	63770	0.0017
