Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	1	3208470	245880329	129055	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	2	474222	29584669	17858	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	2	29585292	29587202	4	-1.0592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	2	29590842	84579344	30840	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	2	84585799	84585992	2	-1.7487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	2	84586092	242124735	82548	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	3	526235	199023074	106359	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	4	1043934	189836143	102688	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	967233	5693744	3261	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	5694346	5694845	3	-1.1299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	5699827	36616853	17840	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	36617671	36617703	2	-1.3626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	36621446	66326157	14362	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	66328145	66329483	2	-1.4313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	5	66331924	180293075	65002	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	6	959281	170745844	96445	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	7	671810	158077879	81288	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	8	607667	1847344	599	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	8	1847582	1847607	2	-1.4083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	8	1849752	145304484	80901	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	9	779932	140058573	67990	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	10	405240	135075077	80843	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	11	446120	133647740	77241	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	12	760163	131671419	73932	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	13	18348806	27516160	5106	-0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	13	27516175	27516186	2	-1.6797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	13	27516198	31881554	3154	-0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	13	31882135	31882798	2	-2.527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	13	31883950	114005560	48368	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	14	19571208	105059083	49437	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	15	21238778	99701830	44520	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	16	593460	80262339	36237	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	16	80263472	80264753	2	-1.4634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	16	80265218	87907437	4612	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	17	933971	78510305	36981	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	18	319586	75210228	42650	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	19	235018	63570038	23944	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	20	403764	61690281	37277	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	21	14269492	18496676	2616	-0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	21	18497106	18497367	2	-1.3611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	21	18500808	46503202	17962	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	22	15803930	47717016	16923	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B04_896626	X	3167107	154558783	63774	0.0017
