Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	1	3218610	247813706	129071	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	2	484222	14182205	8535	-0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	2	14185902	14211365	13	-1.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	2	14211445	242476062	122671	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	3	2212571	197538677	106324	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	4	1053934	66567056	36221	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	4	66567179	66567198	2	-1.6431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	4	66568768	188763651	66469	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	5	914233	31276399	17976	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	5	31278764	31278943	2	-1.5937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	5	31279298	56727674	12031	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	5	56727958	56738374	10	-0.82
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	5	56740918	180360469	70448	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	1014281	117939097	65075	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	117941011	117948931	5	-1.429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	117950691	119689477	656	-0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	119689759	119710923	11	-1.0374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	119711884	148501944	17514	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	148506612	148506944	2	-1.6453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	148507255	149989457	1014	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	149996720	149996994	2	-1.3961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	6	149999787	170903919	12154	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	7	705284	158385118	81283	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	8	617667	96756927	52555	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	8	96757114	96759285	5	-1.4833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	8	96762253	145232496	28934	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	9	789932	140938752	68003	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	10	415240	135225087	80827	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	11	456120	12305051	6997	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	11	12305402	12306437	2	-1.7502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	11	12307784	134142530	70215	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	12	889902	121641509	68712	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	12	121641625	121643856	2	-3.1731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	12	121644569	123139620	578	-0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	12	123141075	123149096	4	0.7803
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	12	123149891	133161346	4610	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	13	19450806	58728043	22812	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	13	58728266	58863133	81	-1.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	13	58866016	114987458	33726	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	14	20501368	105988038	49429	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	15	23687685	101884307	44500	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	16	653459	89379936	40786	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	17	987221	5031769	1725	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	17	5037724	5048985	8	-0.7165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	17	5052236	80917016	35245	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	18	329586	9283948	4993	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	18	9285824	9285892	2	-2.0946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	18	9286021	77109240	37640	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	19	284018	58878226	23942	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	20	455764	62219837	37273	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	21	15347621	47678774	20572	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	22	17423930	43255140	12498	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	22	43256778	43256798	2	-1.4722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	22	43259953	49331012	4416	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	X	3157107	47773826	20160	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	X	47774683	47778750	4	-2.3558
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B07_896616	X	47778773	154905589	43464	0.0108
