Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	3208470	30850052	14656	0.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	30850420	30851126	2	-1.4453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	30851424	96932315	39460	0.1336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	96933141	97286601	182	-0.1043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	97288742	100660338	2029	0.1698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	100660595	100662864	2	-1.2236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	100666658	189922568	37073	0.1339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	189925440	189927457	2	-1.5146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	189930937	213205803	14870	0.1331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	213206510	213206874	2	-1.1922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	213214810	221185072	5287	0.169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	221189941	245880329	15500	-0.1632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	474222	94725615	50312	0.3562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	94725979	186605311	49143	-0.1342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	186605568	187082888	250	0.1953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	187084965	215693775	15397	-0.119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	215695628	228391867	8143	0.8526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	228396733	235150480	3846	-0.5823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	235152349	235161323	13	0.8114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	235163835	242124735	4141	-0.6106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	526235	14473652	7416	0.1464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	14473757	14474024	2	-1.3016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	14475748	35304723	12250	0.1792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	35305177	36596680	838	0.4497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	36597318	76304369	23264	0.1521
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	76304740	76643167	156	0.4855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	76646675	199023074	62439	0.1749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	1043934	6854461	3068	-0.6316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	6855052	23896610	11402	-0.1267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	23899552	45415044	12480	0.1808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	45420210	46053820	285	-0.4862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	46058489	47631729	825	-0.1281
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	47632399	189836143	74563	-0.5189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	967233	22603013	13128	0.718
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	22603102	23002626	213	0.418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	23003936	23021090	13	-0.0745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	23021531	45414213	12580	0.4023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	50160613	145872489	53007	-0.1354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	145876088	180293075	21535	0.5796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	959281	62292496	33895	0.3685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	62294926	92233554	16684	-0.1261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	92236183	92271118	23	0.3515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	92271202	170745844	45856	-0.1373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	7	671810	158077879	81297	0.3268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	607667	38521308	22141	-0.1639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	38525952	38526283	2	-2.2204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	38527563	43052529	2604	-0.1842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	47580110	145304484	56766	0.1576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	779932	7721398	4184	-0.1867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	7763114	8310837	363	-0.5867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	8317764	8617476	291	-0.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	8618586	9158215	321	0.1507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9162296	9189411	35	-0.5646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9190590	9520755	150	0.1357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9521452	9584429	16	-0.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9585860	9589760	2	-1.4652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9591987	10028041	231	-0.1262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	10030620	10361073	130	-0.5231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	10361281	38737064	17591	-0.1552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	38737688	74470431	3088	-0.5605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	74474379	74474889	3	-2.9914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	74475723	82449463	5489	-0.5455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	82449742	82453002	5	-1.8697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	82453656	140058573	36047	-0.5728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	405240	7515951	4740	0.1148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	7516650	7530212	11	-0.6838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	7534296	33718035	18322	0.1402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	33718478	33719035	2	-1.0762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	33724885	35124099	974	0.1481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	35125218	135075077	56785	-0.1566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	446120	106237478	58736	0.1423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	106240903	106285685	27	-0.7516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	106285940	109336030	1617	-1.1415
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	109345206	109472348	95	-2.6444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	109475449	116338641	4812	-1.2096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	116346124	120724934	2981	-0.6176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	120725316	121064472	276	0.0956
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	121066307	122817953	1256	0.3853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	122820494	123527398	531	0.1407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	123532312	130223840	4641	-0.1697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	130224075	133647740	2209	0.2146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	760163	85701505	47324	0.1475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	85702216	106119368	13069	-0.1105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	106119596	106119697	2	-1.3627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	106124193	126392061	11733	-0.1521
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	126393523	131671419	1806	0.1252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	13	18348806	114005560	56571	-0.5423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	14	19571208	105059083	49438	0.1271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	21238778	56086049	18531	-0.1564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	56088489	73820382	11018	0.3371
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	73822981	73824014	2	-0.8096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	73826232	99701830	14968	0.3608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	593460	31757800	13884	0.1008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	45065166	64020359	12256	-0.5688
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	64020783	64021256	4	-2.3945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	64021526	87907437	14676	-0.606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	17	933971	21245985	9623	-0.6298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	17	22294644	78510305	27346	0.499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	319586	10346076	5816	0.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	10354921	14650482	2395	-0.218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	16943745	18838594	918	-0.5225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	18840250	18860594	9	-1.1776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	18863461	75210228	33489	-0.5131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	19	235018	63570038	23945	-0.2391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	403764	7269903	4181	0.0677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	7274216	7274467	2	-1.2266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	7275572	26145899	12637	0.1218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	29307634	61690281	20454	0.5299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	21	14269492	46503202	20581	0.133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	22	15803930	47717016	16923	0.6515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	X	3167107	154558783	63708	-5e-04
