Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	3218610	31077465	14654	0.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	31077833	31078539	2	-1.4453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	31078837	97159727	39523	0.1326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	97160553	97514013	182	-0.1043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	97516154	100887750	2029	0.1698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	100888007	100890276	2	-1.2236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	100894070	191655945	37069	0.1339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	191658817	191660834	2	-1.5146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	191664314	215139180	14871	0.1331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	215139887	215140251	2	-1.1922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	215148187	223118449	5287	0.169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	1	223123318	247813706	15497	-0.1632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	484222	95361888	50304	0.3562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	95362252	186897066	49140	-0.1342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	186897323	187374643	251	0.1946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	187376720	215985530	15398	-0.1189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	215987383	228683623	8143	0.8526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	228688489	235485741	3846	-0.5819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	235487610	235496584	13	0.8114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	2	235499096	242476062	4142	-0.6105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	2212571	14498648	7414	0.1463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	14498753	14499020	2	-1.3016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	14500744	35329719	12251	0.1791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	35330173	36621676	838	0.4497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	36622314	76221679	23262	0.1521
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	76222050	76560477	156	0.4855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	3	76563985	197538677	62436	0.1749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	1053934	6803560	3068	-0.6316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	6804151	24287512	11403	-0.1265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	24290454	45720287	12479	0.1808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	45725453	46359063	285	-0.4862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	46363732	47936972	825	-0.1281
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	4	47937642	188763651	74569	-0.5187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	914233	22567256	13130	0.7178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	22567345	22966869	213	0.418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	22968179	22985333	13	-0.0745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	22985774	45378456	12578	0.4023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	50124856	145892296	53008	-0.1354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	5	145895895	180360469	21534	0.5795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	1014281	62234537	33898	0.3684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	62236967	92176833	16683	-0.1261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	92179462	92214397	23	0.3515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	6	92214481	170903919	45863	-0.1373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	7	705284	158385118	81298	0.3267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	617667	38402151	22141	-0.1639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	38406795	38407126	2	-2.2204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	38408406	42933372	2604	-0.1842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	8	47460945	145232496	56773	0.1575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	789932	7731398	4184	-0.1867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	7773114	8320837	363	-0.5867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	8327764	8627476	291	-0.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	8628586	9168215	321	0.1507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9172296	9199411	35	-0.5646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9200590	9530755	150	0.1357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9531452	9594429	16	-0.2009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9595860	9599760	2	-1.4652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	9601987	10038041	231	-0.1262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	10040620	10371073	130	-0.5231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	10371281	38747064	17597	-0.155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	38747688	75280611	3088	-0.5601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	75284559	75285069	3	-2.9914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	75285903	83259643	5489	-0.5454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	83259922	83263182	5	-1.8697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	9	83263836	140938752	36053	-0.5727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	415240	7475945	4740	0.1148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	7476644	7490206	11	-0.6838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	7494290	33678029	18322	0.1402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	33678472	33679029	2	-1.0762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	33684879	35084093	974	0.1481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	10	35085212	135225087	56783	-0.1566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	456120	106732268	58728	0.1423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	106737224	106780475	26	-0.7445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	106780730	109830820	1617	-1.1415
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	109839996	109967138	95	-2.6444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	109970239	116833431	4811	-1.2094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	116840914	121219724	2981	-0.6176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	121220106	121559262	276	0.0956
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	121561097	123312743	1256	0.3853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	123315284	124022188	531	0.1407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	124027102	130718630	4641	-0.1697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	11	130718865	134142530	2209	0.2146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	889902	87177374	47320	0.1475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	87178085	107595238	13069	-0.1105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	107595466	107595567	2	-1.3627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	107600063	127826108	11732	-0.1521
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	12	127827570	133161346	1806	0.1252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	13	19450806	114987458	56567	-0.5423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	14	20501368	105988038	49436	0.1271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	23687685	58298757	18532	-0.1563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	58301197	76033327	11016	0.3371
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	76035926	76036959	2	-0.8096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	15	76039177	101884307	14967	0.3609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	653459	31850299	13884	0.1008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	46507665	65462858	12256	-0.5688
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	65463282	65463755	4	-2.3945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	16	65464025	89379936	14611	-0.6061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	17	987221	21305392	9623	-0.6298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	17	25270517	80917016	27346	0.499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	329586	10356076	5818	0.0593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	10364921	14660482	2393	-0.2182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	18689747	20584596	918	-0.5225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	20586252	20606596	9	-1.1776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	18	20609463	77109240	33486	-0.513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	19	284018	58878226	23945	-0.2391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	455764	7321903	4182	0.0676
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	7326216	7326467	2	-1.2266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	7327572	26197899	12638	0.1217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	20	29843973	62219837	20454	0.5299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	21	15347621	47678774	20580	0.133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	22	17423930	49331012	16922	0.6515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B08_896634	X	3157107	154905589	63725	-5e-04
