Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	1	3208470	245880329	129074	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	2	474222	242124735	131267	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	3	526235	199023074	106370	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	1043934	74643628	39946	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	74643976	74653175	2	-1.3714
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	74655918	81981933	4394	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	81984263	81987495	2	-1.6628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	81993768	86862766	2994	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	86862881	86863126	3	0.9963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	4	86863154	189836143	55374	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	5	967233	180293075	100489	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	6	959281	170745844	96458	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	7	671810	158077879	81298	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	8	607667	145304484	81519	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	779932	32067548	19212	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	32067595	32067619	2	-1.1151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	32067998	74701870	7333	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	74701947	74702120	3	-0.9181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	74703392	103425621	19026	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	103425634	103426199	6	-0.9011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	9	103426277	140058573	22426	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	10	405240	135075077	80852	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	11	446120	133647740	77248	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	12	760163	131671419	73942	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	13	18348806	114005560	56634	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	14	19571208	37704925	9908	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	14	37705485	37705561	3	-1.1939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	14	37708256	105059083	39530	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	15	21238778	59004665	20626	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	15	59005277	59005339	2	-1.4831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	15	59008484	99701830	23898	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	16	593460	87907437	40860	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	17	933971	50495476	22256	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	17	50496000	50496078	2	-1.1265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	17	50498343	78510305	14727	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	18	319586	75210228	42648	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	19	235018	63570038	23945	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	20	403764	61690281	37275	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	21	14269492	46503202	20580	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	22	15803930	47717016	16922	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	X	3167107	82082725	31452	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	X	82087663	82093707	4	-1.0524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B09_896480	X	82095331	154558783	32321	0.0014
