Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	1	3208470	195838200	96759	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	1	195838607	195859834	15	-0.6854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	1	195865653	230452532	22234	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	1	230453622	230454564	2	-1.6591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	1	230459680	245880329	10043	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	2	474222	242124735	131263	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	526235	81638584	46742	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	81641889	81669631	18	-0.4099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	81672900	83113098	775	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	83115236	83146868	21	-0.4483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	83150757	90390362	3336	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	90390567	90568652	20	-0.6948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	3	95217361	199023074	55451	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	4	1043934	46470821	27420	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	4	46474827	46475327	2	-1.6662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	4	46477332	65723041	8454	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	4	65731510	65747447	14	0.5526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	4	65750963	189836143	66822	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	5	967233	180293075	100482	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	959281	45967827	26986	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	45971421	45974660	6	-0.9533
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	45978399	67197014	9263	-0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	67199955	67204006	6	-0.9073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	67205380	98754956	17401	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	98758931	98759316	2	-1.666
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	98761783	102570833	2333	-0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	102577305	102591852	15	-0.5377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	102595852	141344733	22823	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	141345172	141360573	10	-0.7307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	6	141360733	170745844	17609	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	671810	2159445	407	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	2161055	2168900	2	-1.5124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	2169871	15986824	7252	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	15989599	15989615	3	-1.8179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	15989655	137640246	63436	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	137645295	137652622	7	-0.905
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	7	137655804	158077879	10192	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	8	607667	105395006	57550	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	8	105398272	105398830	3	-1.9615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	8	105400313	145304484	23959	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	9	779932	14092612	7324	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	9	14093242	14093618	3	-1.4061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	9	14095813	140058573	60679	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	10	405240	135075077	80851	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	11	446120	99672462	54647	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	11	99676655	99689353	14	-0.5362
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	11	99697471	133647740	22583	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	12	760163	131671419	73938	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	13	18348806	114005560	56631	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	14	19571208	45656215	13199	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	14	45656283	45712263	25	-0.3705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	14	45712712	62711170	10528	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	14	62711384	62711624	2	-1.8033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	14	62711953	105059083	25681	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	15	21238778	99701830	44519	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	16	593460	87907437	40858	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	17	933971	78510305	36983	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	18	319586	75210228	42653	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	19	235018	63570038	23943	-0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	20	403764	61690281	37276	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	21	14269492	43187048	19218	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	21	43188383	43194058	8	-1.2841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	21	43194988	46503202	1353	-0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	22	15803930	47717016	16924	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_B11_896490	X	3167107	154558783	63737	0.0065
