Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	1	3208470	245880329	129049	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	2	474222	242124735	131249	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	3	526235	199023074	106351	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	4	1043934	189836143	102702	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	5	967233	175279203	98453	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	5	175279234	175281428	4	-1.092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	5	175281448	180293075	2024	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	6	959281	170745844	96439	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	7	671810	158077879	81285	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	8	607667	145304484	81503	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	9	779932	140058573	67994	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	10	405240	66512934	38490	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	10	66513776	66514322	4	-1.2737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	10	66522713	135075077	42356	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	11	446120	117329802	65983	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	11	117331238	117343150	5	-1.1377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	11	117345362	133647740	11243	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	12	760163	131671419	73933	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	13	18348806	114005560	56628	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	14	19571208	27849395	3937	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	14	27851277	27858640	2	-1.3879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	14	27861385	105059083	45490	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	15	21238778	47431276	13163	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	15	47439816	47471374	12	0.5338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	15	47482875	99701830	31343	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	593460	8136935	3347	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	8138663	8141755	5	-0.9167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	8143680	73981655	27930	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	73983798	73984526	5	-0.8377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	73985697	74352527	159	0.0294
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	74354462	74355880	2	-0.7463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	74355992	75187179	609	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	75193464	75196932	4	1.037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	75206086	82351496	6143	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	82351498	82351507	2	-1.9537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	82351525	87907437	2646	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	17	933971	78510305	36980	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	18	319586	75210228	42650	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	19	235018	19526885	7547	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	19	19529526	19529975	2	-1.3321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	19	19530441	63570038	16395	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	403764	26120066	16809	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	26125105	26125804	3	-1.1736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	26126021	55406171	16428	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	55406306	55412894	5	-0.9171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	55415052	61690281	4030	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	21	14269492	46503202	20581	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	22	15803930	47717016	16919	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	X	3167107	154558783	63641	0.0072
