Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	1	3218610	247813706	129105	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	2	484222	242476062	131241	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	3	2212571	197538677	106345	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	4	1053934	188763651	102707	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	5	914233	175346597	98453	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	5	175346628	175348822	4	-1.092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	5	175348842	180360469	2024	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	6	1014281	170903919	96448	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	7	705284	158385118	81286	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	8	617667	145232496	81510	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	9	789932	140938752	68006	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	10	415240	66842928	38490	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	10	66843770	66844316	4	-1.2737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	10	66852707	135225087	42354	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	11	456120	117824592	65973	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	11	117826028	117837940	5	-1.1377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	11	117840152	134142530	11243	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	12	889902	133161346	73928	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	13	19450806	114987458	56624	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	14	20501368	28779644	3937	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	14	28781526	28788889	2	-1.3879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	14	28791634	105988038	45488	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	15	23687685	49643984	13164	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	15	49652524	49684082	12	0.5338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	15	49695583	101884307	31340	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	653459	8196934	3347	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	8198662	8201754	5	-0.9167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	8203679	75424154	27864	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	75426297	75427025	5	-0.8377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	75428196	75795026	159	0.0294
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	75796961	75798379	2	-0.7463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	75798491	76629678	609	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	76635963	76639431	4	1.037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	76648585	83793995	6143	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	83793997	83794006	2	-1.9537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	16	83794024	89379936	2646	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	17	987221	80917016	36980	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	18	329586	77109240	42647	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	19	284018	19665885	7547	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	19	19668526	19668975	2	-1.3321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	19	19669441	58878226	16395	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	455764	26172066	16812	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	26177105	26177804	3	-1.1736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	26178021	55972765	16428	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	55972900	55979488	5	-0.9171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	20	55981646	62219837	4030	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	21	15347621	47678774	20580	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	22	17423930	49331012	16918	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C01_896528	X	3157107	154905589	63658	0.0072
