Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	1	3208470	245880329	128938	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	2	474222	242124735	131172	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	3	526235	3358021	612	-0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	3	3358095	3358206	2	-1.2184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	3	3360209	7412037	2009	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	3	7412599	7412614	2	-1.5473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	3	7414288	199023074	103651	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	4	1043934	98201654	53670	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	4	98207371	98373470	88	-1.1583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	4	98378031	189836143	48895	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	5	967233	180293075	100423	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	6	959281	130847627	72272	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	6	130847741	130848009	2	-1.6625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	6	130848323	137543916	4433	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	6	137545054	137545221	3	-1.7336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	6	137545290	170745844	19681	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	7	671810	38571391	21885	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	7	38575184	38583547	4	-1.2689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	7	38584036	158077879	59372	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	8	607667	119176615	64937	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	8	119176948	119182259	4	-1.0337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	8	119182417	145304484	16515	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	9	779932	109990198	49670	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	9	109990488	109992872	3	-1.3416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	9	109994484	140058573	18295	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	405240	12741948	8584	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	12742074	12743946	2	-1.302
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	12744197	37100227	16562	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	37104543	37106347	2	-1.2953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	37106835	73121665	17176	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	73126384	73126543	2	-1.4336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	10	73127494	135075077	38477	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	11	446120	83036277	44489	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	11	83039833	83040073	2	-1.5232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	11	83040125	133647740	32703	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	12	760163	3197527	1077	-0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	12	3197604	3281728	73	0.621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	12	3300629	104595681	58122	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	12	104597693	104602458	4	-1.2314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	12	104604379	131671419	14617	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	13	18348806	114005560	56588	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	14	19571208	105059083	49397	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	15	21238778	99701830	44488	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	16	593460	87907437	40837	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	17	933971	78510305	36955	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	18	319586	75210228	42627	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	19	235018	39417139	13564	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	19	39419675	39420322	3	-1.0287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	19	39422524	63570038	10365	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	20	403764	61690281	37246	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	21	14269492	46503202	20571	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	22	15803930	47717016	16907	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	X	3167107	123453506	49829	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	X	123455107	123455221	2	-4.0352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C03_896592	X	123455902	154558783	13679	0.0027
