Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	1	3208470	245880329	128984	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	2	474222	242124735	131199	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	526235	59334793	33035	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	59335130	59335487	2	-1.3817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	59335583	66827027	4651	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	66827089	66827580	2	-2.9625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	66827628	199023074	68626	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	4	1043934	187100861	101583	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	4	187102315	187103064	2	-1.9996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	4	187104075	189836143	1094	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	967233	77153496	41079	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	77153515	77153525	2	-1.2602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	77155814	158268056	46086	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	158271682	158292648	10	-0.7527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	158296035	180293075	13254	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	959281	88322065	48125	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	88322563	88417623	49	-1.0443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	88425908	93544682	3151	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	93544774	93545298	2	-1.3012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	93545334	170745844	45094	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	7	671810	158077879	81273	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	607667	71116908	38100	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	71117230	71117388	4	-0.9433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	71123715	74697522	2286	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	74698306	74700698	2	-1.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	74703772	136384119	36689	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	136385535	136392532	10	-1.1885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	136392966	145304484	4378	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	9	779932	140058573	67981	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	10	405240	135075077	80808	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	11	446120	133647740	77205	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	12	760163	131671419	73892	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	13	18348806	63913547	25928	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	13	63914135	63914137	2	-1.4492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	13	63914481	114005560	30676	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	14	19571208	105059083	49409	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	15	21238778	44224025	11060	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	15	44226603	44240296	7	-0.7435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	15	44247305	99701830	33436	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	16	593460	6384760	2501	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	16	6385055	6389366	3	-1.1607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	16	6389390	87907437	38338	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	17	933971	78510305	36964	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	18	319586	75210228	42631	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	19	235018	63570038	23936	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	20	403764	61690281	37265	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	21	14269492	25824434	7077	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	21	25828216	25828319	2	-1.1227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	21	25830255	46503202	13493	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	22	15803930	47717016	16908	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	3167107	109767462	43095	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	109769963	109799714	11	-0.6258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	109800393	123435973	6755	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	123436075	123437375	2	-3.7902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	123438597	154558783	13723	0.0039
