Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	1	3218610	247813706	129040	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	2	484222	242476062	131191	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	2212571	59359753	33035	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	59360090	59360447	2	-1.3817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	59360543	66744337	4650	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	66744399	66744890	2	-2.9625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	3	66744938	197538677	68621	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	4	1053934	186863867	101589	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	4	186865321	186866070	2	-1.9996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	4	186867081	188763651	1093	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	914233	77117740	41080	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	77117759	77117769	2	-1.2602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	77120058	158335478	46082	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	158339104	158360070	10	-0.7527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	5	158363457	180360469	13257	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	1014281	88265346	48127	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	88265844	88360904	49	-1.0443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	88369189	93487961	3151	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	93488053	93488577	2	-1.3012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	6	93488613	170903919	45101	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	7	705284	158385118	81274	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	617667	70954354	38103	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	70954676	70954834	4	-0.9433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	70961161	74534968	2288	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	74535752	74538144	2	-1.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	74541218	136314937	36691	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	136316353	136323350	10	-1.1885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	8	136323784	145232496	4378	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	9	789932	140938752	67993	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	10	415240	135225087	80806	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	11	456120	134142530	77195	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	12	889902	133161346	73887	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	13	19450806	65015546	25925	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	13	65016134	65016136	2	-1.4492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	13	65016480	114987458	30675	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	14	20501368	105988038	49407	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	15	23687685	46436733	11061	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	15	46439311	46453004	7	-0.7435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	15	46460013	101884307	33433	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	16	653459	6444759	2501	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	16	6445054	6449365	3	-1.1607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	16	6449389	89379936	38272	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	17	987221	80917016	36964	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	18	329586	77109240	42628	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	19	284018	58878226	23936	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	20	455764	62219837	37268	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	21	15347621	26902563	7076	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	21	26906345	26906448	2	-1.1227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	21	26908384	47678774	13493	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	22	17423930	49331012	16907	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	3157107	109880806	43110	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	109883307	109913058	11	-0.6258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	109913737	123608292	6759	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	123608394	123609694	2	-3.7902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C04_896610	X	123610916	154905589	13721	0.0039
