Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	61735	25583341	14166	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	25593128	25662212	31	-1.2612
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	25663310	70997442	27707	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	70997639	70997811	2	-1.6131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	70997913	70997945	2	-0.4781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	70998145	72756113	1133	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	72756142	72763370	8	-0.7224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	72768418	72811148	48	1.2119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	72811904	73301653	340	0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	73301831	73315916	11	-0.5456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	73317778	83816477	6748	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	83825577	83825590	2	-2.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	83828273	104155643	12974	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	104155731	104259444	31	-0.5907
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	104260032	106019205	924	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	106019236	106022375	16	0.8228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	106024055	110233053	2671	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	110233118	110236947	11	-0.7446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	110239522	152555706	10026	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	152555767	152586278	31	-0.7565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	152586540	158866573	3829	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	158868501	158869759	2	-1.4733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	158874818	174796556	11248	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	174796699	174801854	16	-0.693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	174801872	196732086	14667	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	196738623	196816730	93	-0.4507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	196823317	199111426	1380	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	199111521	199112524	5	-1.3539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	199113011	240391740	28632	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	240394015	240394124	5	-2.1095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	240394139	249224388	5933	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	12784	3732587	2571	0.0361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	3732855	3736538	3	-1.1327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	3742071	4205687	414	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	4213864	4223167	36	-2.1762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	4223512	35312906	21530	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35319889	35458263	89	0.5303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35469467	35975973	396	0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35977790	35987916	6	-1.5689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35987947	38954419	2320	0.0146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	38954495	38972281	9	0.783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	38972826	52739217	9835	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	52741737	52781504	40	0.376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	52781522	54502912	1293	0.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	54504357	54505988	2	-2.0632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	54508020	54583417	52	0.1145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	54583542	54583590	2	-1.4659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	54583756	55627639	819	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	55627771	55627913	2	1.5394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	55632245	86937687	19775	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	86953070	86953854	2	-1.6136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	86970406	100598335	3479	-0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	100601598	100602769	2	-1.3268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	100603279	106874649	4246	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	106874722	106887255	14	-0.5048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	106887408	110462496	2111	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	110467473	110477250	2	1.706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	110501512	115530841	2452	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	115535914	115542394	26	-0.7351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	115542505	146864443	19358	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	146864457	146866934	21	-1.6976
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	146877806	184085453	22871	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	184085788	184089724	9	-0.9074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	184093998	243089456	36280	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	60345	75421170	52759	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	75427107	75549718	56	-0.6703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	75549946	95456106	9162	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	95466880	95468110	2	-2.4104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	95468680	175883749	49224	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	175888059	175914479	34	-0.8453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	175916221	186429001	6277	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	186429008	186434797	4	-1.6773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	186436604	192874747	4714	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	192877902	192882903	20	0.8581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	192886435	197896118	2706	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	12281	4166518	1717	0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	4166983	4175577	5	-0.7356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	4176614	9461230	3531	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	9464537	9464972	2	-1.164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	9470734	10210390	552	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	10214160	10230494	20	0.5847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	10230618	34779054	17012	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	34786500	34824725	38	-2.1755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	34829872	49297235	8984	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	49309854	49658612	20	-0.5527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	52685699	64693940	7576	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	64697469	64704293	7	-1.8377
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	64705156	64707605	16	-0.5506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	64707754	64708258	6	-2.5531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	64716431	69374955	2885	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	69375160	69591612	75	0.4123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	69591782	86976391	10822	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	86976444	86979764	17	-0.9085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	86979944	92069251	3139	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	92069904	92080617	8	-0.7955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	92081565	137474055	26613	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	137480493	137672030	114	-0.9926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	137679664	152791637	9200	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	152791654	152792891	11	-0.7313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	152794796	183565008	20122	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	183565618	183574838	14	-0.5697
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	183574890	190195118	4594	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	190195622	190199264	3	-2.9367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	190199771	191027923	386	0.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	15532	15719350	12215	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	15720075	15720597	9	-0.9312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	15723346	17504277	1188	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	17508439	17642551	29	-0.7635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	17655138	34259509	10323	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	34264347	34264555	3	-1.1455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	34266554	46271108	7044	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	46271930	46273502	6	-2.6092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	46278212	57326280	5084	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	57329115	57332060	16	-0.4991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	57332075	60926866	2391	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	60929982	60930584	4	-1.3602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	60931629	78107908	9897	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	78109991	78111171	2	-4.9221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	78115511	140218722	37845	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	140223836	140243756	13	-0.6262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	140252163	175460087	24330	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	175465689	175469507	2	-2.2997
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	175470324	176082625	255	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	176084521	176129802	31	0.3414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	176130808	180181586	2149	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	180182448	180199253	11	-0.7121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	180200629	180790320	288	0.0282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	149661	23057637	17734	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	23060991	23064254	4	-1.0456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	23067645	29837188	4006	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	29837314	29849267	14	-0.9773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	29850196	31277686	672	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	31280823	31309924	13	0.8416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	31317347	32449523	505	0.0433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	32452801	32454523	4	-1.1103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	32456683	53931151	13813	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	53931230	53931855	6	1.3639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	53935348	74594734	10531	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	74594754	74601410	4	-1.285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	74603555	77440094	1772	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	77440818	77452673	16	-0.7064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	77452689	78962225	975	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	78962239	79032592	114	0.3518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	79034940	103738289	15499	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	103738314	103762061	40	0.6539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	103765470	124431774	12704	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	124435941	124471533	22	0.5387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	124473999	126182763	1178	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	126183692	126186194	2	-2.5587
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	126186776	171051005	30353	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	43355	7144044	3585	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	7145843	7150307	3	-1.4388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	7152178	22434780	12520	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	22435472	22436487	2	-2.6898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	22438754	64594341	25615	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	64594929	64595698	4	1.3469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	64637128	65002681	184	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	65002683	65026492	4	-0.953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	65051738	70420438	2964	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	70423250	70426141	2	-2.3448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	70428243	91208142	12003	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	91218884	91219132	3	-1.2775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	91225032	100329244	5159	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	100329265	100332842	2	-1.369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	100351005	100961428	227	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	100962202	101141971	81	0.5711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	101142190	109433798	5035	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	109437092	109437757	14	0.4797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	109437772	109441212	10	-0.0414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	109441244	109453858	10	0.8259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	109453910	141763124	19995	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	141769643	141791908	41	-0.4816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	141792107	154393171	7810	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	154396107	154399613	3	1.4003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	154400830	159127004	3246	0.0296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	31254	12198254	11313	0.0267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	12216009	12247486	40	-0.5417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	12260927	18261679	5398	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	18262546	18271185	7	-1.4152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	18271387	24974577	5095	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	24975500	24979972	16	0.8419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	24979987	144699157	73591	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	144705157	144706884	6	-0.8552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	144706978	144707808	3	-2.5566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	144718989	146298155	506	0.0608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	46587	12554856	11719	0.0214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	12556594	12562294	3	-1.751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	12565520	23363115	8737	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	23363933	23373484	7	0.91
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	23378488	24503816	797	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	24504125	24517682	19	-0.7649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	24519684	44243434	10174	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	44244880	44837527	54	0.5998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	44840918	45407529	35	-0.0543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	45407542	45556556	14	-0.4997
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	45616519	79120919	6279	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	79122346	79125340	14	-0.8328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	79125380	90522594	8293	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	90554151	90554219	2	-1.9133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	90557957	107503369	11398	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	107505687	108199189	606	-0.9761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	108215424	126860818	14024	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	126861389	126861655	2	-1.7257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	126862478	141054761	7756	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	141071475	141091394	8	0.9076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	72759	24377675	19247	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	24377676	24378054	9	-1.9356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	24378908	27223903	1991	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	27225904	27230675	15	0.4375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	27230737	27587531	196	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	27593427	27597438	2	-1.4234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	27607185	47897394	10489	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	47912899	47948060	3	1.1967
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	47960476	49045681	303	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	49045895	49082219	2	1.3688
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	49082570	51830360	1462	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	51840984	51891920	4	-2.2317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	51903768	55531289	2780	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	55533109	55535920	2	-1.2141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	55536004	56678741	867	-0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	56679054	56692599	8	-1.1241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	56695418	67306276	7363	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	67307923	67325453	31	-0.3623
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	67326066	78252851	6803	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	78257061	78257610	2	-1.3687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	78261267	84065066	4218	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	84065725	84068967	3	-1.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	84073159	89061261	3460	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	89069796	89112629	11	-0.7605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	89112893	135506704	31823	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	198510	5788080	3307	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	5788092	5809139	31	-0.4525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	5809338	6107790	239	0.0495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	6108269	6122503	9	-0.7222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	6123888	55374188	31079	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	55374203	55447465	53	-0.4029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	55452534	62040519	3967	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	62040793	62043174	2	-2.0411
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	62047967	99839689	23231	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	99843346	99843362	2	-1.5739
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	99843602	134944770	25236	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	150442	9630556	6203	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	9633870	9728292	25	-1.3702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	9734969	11236215	1051	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	11236836	11241532	3	1.3263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	11251874	28095493	11743	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	28095558	28097644	10	-0.8427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	28103460	45904438	9496	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	45905840	45909537	3	-2.3286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	45913292	84163187	23664	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	84163290	84165241	3	-1.5112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	84165279	132118633	32299	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	132120247	132133335	16	0.6361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	132142331	133778189	572	0.0594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	19026949	32532121	9642	0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	32532622	32538423	18	-0.6497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	32540047	38075965	3908	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	38076267	38084757	12	0.7737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	38088330	43297593	3691	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	43302287	43302525	2	-1.474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	43302606	53059216	6213	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	53071152	53157318	17	-0.5833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	53159851	115108397	40810	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	19002124	19660853	47	-0.0698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	19689317	20143509	33	-0.5786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	20157843	73995774	34252	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	74001123	74020979	9	-0.9955
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	74029900	100156771	17945	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	100157791	100160380	2	-2.1605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	100162377	106751284	2975	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	106753859	106753867	3	-1.2698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	106754003	106777343	14	-0.246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	106783044	106818557	10	-0.9186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	106820744	106874361	31	0.0642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	106879831	106918094	50	-0.6005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	106918108	107285437	225	0.0641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	20016328	20269773	57	-0.0353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	20284066	22421411	299	0.4589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	22422348	22587474	65	0.8383
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	22673399	22751245	5	0.3115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	22751256	34694636	7388	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	34695322	34830944	76	-0.5918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	34855818	76891241	26466	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	76891511	76892026	7	1.113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	76892041	76895775	14	0.5461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	76902179	102469040	17689	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	60777	87660783	51340	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	87669407	88053123	220	0.5284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	88059575	90287535	885	0.0926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	526	31865853	16458	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	31866067	31867725	2	-1.5025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	31867867	39210143	4387	0.0213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	39211908	39221312	11	-1.2447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	39221607	39413410	115	0.0315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	39414647	39430450	27	1.3042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	39430531	44162597	2513	0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	44163098	44364170	126	0.5061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	44394412	81049726	21667	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	11543	38260480	22850	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	38260490	38265389	14	-0.8562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	38268024	40056569	1215	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	40056601	40057471	23	-0.689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	40057767	51266861	7736	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	51267097	51268184	7	0.8316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	51278269	74779866	16871	0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	74784013	74784709	2	1.5683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	74785022	78015057	2101	0.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	90910	8973217	3223	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	8979684	9005875	28	-0.9507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	9007525	21814919	6431	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	21815640	21822322	6	-1.0326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	21825764	24375449	1524	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	24379102	24385424	9	-0.8469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	24402242	24456957	16	-0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	24460818	24464957	10	-0.7015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	24487682	28424804	218	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	28424869	28426563	2	-1.3057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	28426749	35663774	5184	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	35663843	35663992	4	-1.0859
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	35664043	41352737	2990	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	41357000	41380946	31	-0.6307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	41392155	55312612	7356	0.0193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	55313000	55313817	2	-2.3571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	55314287	56282535	469	0.0308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	56283029	56283067	2	-2.6804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	56286293	59097854	1847	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	61305	1552503	1184	0.0306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	1557190	1571103	35	-0.6491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	1571272	1582207	22	-0.2711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	1590257	15301374	10410	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	15301902	15302374	3	-2.2738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	15305258	15746328	445	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	15755957	15768503	8	-0.8235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	15769704	24719072	7179	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	24719254	24719618	2	-1.4162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	24723609	62956153	23217	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	21	10736871	48096957	24413	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	16052528	16077141	6	0.1205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	16102342	16242677	31	-0.4324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	16248691	17495551	338	-0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	17499034	17499508	2	1.4223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	17499890	24337949	4245	0.049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	24344422	24396814	20	0.6795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	24401529	42897282	12790	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	42899440	42950491	24	0.6163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	42955431	51234455	6107	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	168477	12149837	7089	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	12150186	12150563	5	-2.7116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	12153563	13038923	780	-0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	13039269	13045990	4	-2.0999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	13047167	34945147	14035	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	34947951	34948549	2	-3.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	34948700	155182354	62603	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	Y	2650438	59018259	8634	-0.9213
