Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	3208470	245880329	129029	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	474222	35166410	20910	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35173393	35311767	81	0.5198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35322971	242124735	110263	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	526235	199023074	106353	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	1043934	137693505	74782	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	137699943	137891480	114	-0.9926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	137899114	189836143	27798	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	967233	60962623	32613	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	60965739	60966341	4	-1.3602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	60967386	180293075	67849	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	959281	170745844	96449	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	671810	158077879	81293	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	607667	145304484	81504	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	779932	106543190	47222	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	106545508	107239010	579	-0.9679
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	107255245	125900639	13080	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	125901210	125901476	2	-1.7257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	125902299	140058573	7110	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	405240	84055046	48640	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	84055705	84058947	3	-1.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	84063139	135075077	32192	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	446120	133647740	77237	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	760163	131671419	73928	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	18348806	42195593	15162	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	42200287	42200525	2	-1.474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	42200606	114005560	41459	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	19571208	99226524	46846	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	99227544	99230133	2	-2.1605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	99232130	105059083	2583	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	21238778	99701830	44517	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	593460	86218284	40485	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	86226908	86610624	200	0.5248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	86617076	87907437	172	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	933971	28889966	12898	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	28890180	28891838	2	-1.5025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	28891980	78510305	24079	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	319586	75210228	42646	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	235018	8834217	2688	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	8840684	8866875	28	-0.9507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	8868525	63570038	21225	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	403764	61690281	37274	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	21	14269492	46503202	20579	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	15803930	47717016	16922	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	3167107	34855068	13971	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	34857872	34858470	2	-3.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	34858621	154558783	49730	0.0082
