Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	1	3218610	247813706	129085	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	484222	35312906	20908	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35319889	35458263	81	0.5198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	2	35469467	242476062	110257	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	3	2212571	197538677	106347	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	1053934	137474055	74784	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	137480493	137672030	114	-0.9926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	4	137679664	188763651	27801	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	914233	60926866	32613	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	60929982	60930584	4	-1.3602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	5	60931629	180360469	67849	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	6	1014281	170903919	96458	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	7	705284	158385118	81294	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	8	617667	145232496	81511	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	789932	107503369	47230	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	107505687	108199189	579	-0.9679
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	108215424	126860818	13084	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	126861389	126861655	2	-1.7257
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	9	126862478	140938752	7110	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	415240	84065066	48640	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	84065725	84068967	3	-1.3222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	10	84073159	135225087	32190	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	11	456120	134142530	77227	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	12	889902	133161346	73923	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	19450806	43297593	15159	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	43302287	43302525	2	-1.474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	13	43302606	114987458	41458	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	20501368	100156771	46844	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	100157791	100160380	2	-2.1605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	14	100162377	105988038	2583	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	15	23687685	101884307	44515	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	653459	87660783	40419	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	87669407	88053123	200	0.5248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	16	88059575	89379936	172	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	987221	31865853	12898	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	31866067	31867725	2	-1.5025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	17	31867867	80917016	24079	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	18	329586	77109240	42643	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	284018	8973217	2688	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	8979684	9005875	28	-0.9507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	19	9007525	58878226	21225	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	20	455764	62219837	37277	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	21	15347621	47678774	20578	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	22	17423930	49331012	16921	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	3157107	34945147	13971	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	34947951	34948549	2	-3.5596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C07_896476	X	34948700	154905589	49747	0.0082
