Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	1	3218610	31077465	14642	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	1	31077833	31078539	2	-1.6711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	1	31078837	247813706	114390	-0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	2	484222	159785940	83681	-0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	2	159787453	159787793	2	-2.3331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	2	159787854	242476062	47515	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	3	2212571	10461074	4662	-0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	3	10461104	10461163	2	-1.6673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	3	10461680	197538677	101640	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	4	1053934	164324825	90246	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	4	164328287	164459779	63	0.2866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	4	164459884	181068495	8760	-0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	4	181069369	181130538	70	0.3195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	4	181146224	188763651	3540	-0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	5	914233	32572720	18909	0.2973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	5	32573223	180360469	81533	-0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	6	1014281	57206485	33886	0.3068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	6	62234533	75566597	7376	-0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	6	75567726	88259569	6872	-0.4262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	6	88261601	88369189	52	-0.729
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	6	88369746	170903919	48183	-0.437
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	7	705284	6288869	2057	0.2873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	7	6290535	6341903	20	0.7265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	7	6352277	90600071	43407	0.3002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	7	90600097	158385118	35808	0.5534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	617667	14605751	6670	-0.0232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	14606836	14607919	2	-1.0939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	14608332	70954676	31432	-0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	70954705	70954720	2	-1.4333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	70954834	104807582	19130	-0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	104808416	105051937	122	0.3276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	105063452	113696757	4546	-0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	8	113709690	145232496	19579	0.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	9	789932	32999419	19841	-0.4308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	9	33003897	137641455	47015	-0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	9	137641904	137642577	2	-1.8265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	9	137643459	140938752	1114	-0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	10	415240	135225087	80807	-0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	11	456120	83808598	44783	-0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	11	83846493	109780031	15526	-0.4262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	11	109787226	109787314	3	-1.8573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	11	109792702	112936226	2068	-0.4343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	11	112936329	112941058	3	-1.6344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	11	112943160	134142530	14776	-0.4424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	12	889902	114771436	64221	-0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	12	114771568	114772280	2	-1.094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	12	114775401	133161346	9678	-0.0272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	13	19450806	28644454	5178	-0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	13	28644551	28644830	2	-1.0998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	13	28644885	29238153	434	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	13	29238352	29238827	2	-1.8528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	13	29238898	114987458	50984	-0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	14	20501368	105988038	49411	-0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	15	23687685	46436733	11061	-0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	15	46439311	46453004	7	-0.9273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	15	46460013	87260954	24440	-0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	15	87262203	87348125	93	0.3382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	15	87353489	101884307	8897	-0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	16	653459	1373593	107	0.2832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	16	1381917	46507665	13773	-0.0303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	16	46508460	82609633	23131	0.2934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	16	82612605	89379936	3759	-0.4596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	17	987221	80917016	36962	-0.0225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	18	329586	44482946	23750	-0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	18	44495142	44738755	99	0.2877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	18	44739819	44743252	4	0.7419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	18	44748009	77109240	18773	-0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	19	284018	58878226	23939	-0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	20	455764	62219837	37262	-0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	21	15347621	47678774	20574	-0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	22	17423930	31777607	5742	-0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	22	31778581	31780569	2	-1.2671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	22	31784918	49331012	11164	-0.0263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	X	3157107	99970666	38701	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	X	99972773	99972935	2	1.8052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C08_896540	X	99973710	154905589	25002	-0.0028
