Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	1	3208470	245880329	128920	-0.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	2	474222	242124735	131216	0.1484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	3	526235	61570791	33809	-0.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	3	61670598	61693625	16	-0.9644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	3	61699222	199023074	72444	-0.0518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	4	1043934	189836143	102648	-0.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	967233	102682513	53755	0.1299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	102690962	102732245	27	-0.3532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	102734403	118871737	9642	0.1268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	118872179	118872462	3	-0.9812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	118878574	134771292	9107	0.13
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	134775917	134776324	2	-1.249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	134776914	180293075	27898	-0.0338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	959281	55608811	32972	0.5292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	55614138	56029923	240	0.1529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	56031128	56048546	14	-0.394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	56052360	64609907	1702	0.1593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	64613422	65006521	202	0.5313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	65041061	70591753	3119	0.1528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	70591977	156144279	50187	-0.3516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	156144938	156145617	2	-2.1269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	156146056	170745844	7900	-0.3576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	7	671810	158077879	81240	-0.0665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	8	607667	116995878	63530	0.1942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	8	117000060	117000099	2	1.6541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	8	117000335	145304484	17957	0.3611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	779932	4568661	2686	-0.7288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	4570444	4884234	272	-0.3987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	4943916	5410526	287	-0.6284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5411312	5615673	43	-0.3502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5621068	5667627	19	-0.1367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5691896	5712792	16	-0.388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5718918	15154111	4805	-0.716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15154720	15232896	78	-0.3889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15237714	15238194	4	-1.1115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15240107	15545458	248	-0.3049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15546113	15838009	143	-0.0607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15839101	17919267	1699	0.3019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	17922013	18141987	207	-0.055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	18146177	19208833	981	-0.3375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	19214325	21540592	1722	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	21545226	21592707	30	-0.2998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	21595227	21993260	212	-0.6832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	21993686	31769598	5500	-0.3433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	31773558	31799456	10	-0.8739
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	31799518	38737688	4290	-0.3399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	70228864	140058573	44625	-0.0593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	10	405240	135075077	80778	-0.0615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	446120	12955910	7534	0.1519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	12956732	12960914	4	-1.1709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	12962037	25857566	8726	0.1442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	25859003	25860482	2	1.2778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	25860654	109612862	44287	0.1671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	109612958	117431658	5471	-0.3538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	117431945	117437840	3	-1.7457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	117439914	133647740	11151	-0.3527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	12	760163	131671419	73887	-0.0624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	18348806	86983722	39481	0.1569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	86984562	86998105	14	-0.3608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	86998379	101864822	9508	0.1615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	101870825	101883337	15	0.5623
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	101891047	114005560	7588	0.1611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	14	19571208	105059083	49389	-0.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	15	21238778	99701830	44486	-0.0517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	593460	944695	64	0.261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	945361	945667	2	-1.1894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	947269	31757800	13812	0.2592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	45065166	84552225	25109	-0.2279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	84553796	84554782	2	-1.9048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	84557493	87907437	1816	-0.236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	933971	46502685	20025	-0.0605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	46508763	56154583	5671	0.4845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	56157641	56157841	2	-0.9685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	56162605	78510305	11265	0.4945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	18	319586	75210228	42620	-0.0625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	19	235018	63570038	23925	-0.0634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	20	403764	61690281	37240	-0.0664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	21	14269492	46503202	20573	-0.0644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	22	15803930	29283295	5309	-0.058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	22	29283521	29284075	2	-1.4605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	22	29285878	47717016	11595	-0.0582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	3167107	11631130	2483	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	11631380	11632418	2	-3.7532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	11632449	12801881	873	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	12802569	12806942	8	-1.5299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	12807110	47559431	16685	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	47559847	47566967	5	-3.6327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	47568768	87131265	13730	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	87131744	87137795	3	-2.2975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	87138091	107630947	8140	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	107630991	107631694	2	-3.0959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	107633087	154558783	21528	0.0067
