Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	1	3218610	247813706	128975	-0.0596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	2	484222	242476062	131208	0.1484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	3	2212571	61595751	33807	-0.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	3	61695558	61718585	16	-0.9644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	3	61724182	197538677	72439	-0.0518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	4	1053934	188763651	102653	-0.0638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	914233	102654614	53755	0.1299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	102663063	102704346	27	-0.3532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	102706504	118843838	9642	0.1268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	118844280	118844563	3	-0.9812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	118850675	134743393	9107	0.13
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	134748018	134748425	2	-1.249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	5	134749015	180360469	27898	-0.0338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	1014281	55500852	32974	0.5292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	55506179	55921964	240	0.1529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	55923169	55940587	14	-0.394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	55944401	64551948	1703	0.1592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	64555463	64948562	202	0.5313
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	64983102	70535032	3119	0.1528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	70535256	156102587	50193	-0.3515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	156103246	156103925	2	-2.1269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	6	156104364	170903919	7900	-0.3576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	7	705284	158385118	81241	-0.0665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	8	617667	116926700	63538	0.1942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	8	116930882	116930921	2	1.6541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	8	116931157	145232496	17956	0.3611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	789932	4578661	2686	-0.7288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	4580444	4894234	272	-0.3987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	4953916	5420526	287	-0.6284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5421312	5625673	43	-0.3502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5631068	5677627	19	-0.1367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5701896	5722792	16	-0.388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	5728918	15164111	4806	-0.7159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15164720	15242896	78	-0.3889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15247714	15248194	4	-1.1115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15250107	15555458	248	-0.3049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15556113	15848009	143	-0.0607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	15849101	17929267	1700	0.3017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	17932013	18151987	207	-0.055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	18156177	19218833	981	-0.3375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	19224325	21550592	1722	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	21555226	21602707	30	-0.2998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	21605227	22003260	212	-0.6832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	22003686	31779598	5501	-0.3433
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	31783558	31809456	10	-0.8739
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	31809518	38747688	4293	-0.3397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	9	71039044	140938752	44631	-0.0593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	10	415240	135225087	80776	-0.0615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	456120	12999334	7533	0.1518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	13000156	13004338	4	-1.1709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	13005461	25900990	8725	0.1442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	25902427	25903906	2	1.2778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	25904078	110107652	44280	0.1671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	110107748	117926448	5470	-0.3538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	117926735	117932630	3	-1.7457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	11	117934704	134142530	11151	-0.3527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	12	889902	133161346	73882	-0.0624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	19450806	88185721	39478	0.1569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	88186561	88200104	14	-0.3608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	88200378	103066821	9507	0.1615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	103072824	103085336	15	0.5623
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	13	103093046	114987458	7588	0.1611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	14	20501368	105988038	49387	-0.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	15	23687685	101884307	44484	-0.0517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	653459	1004694	64	0.261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	1005360	1005666	2	-1.1894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	1007268	31850299	13812	0.2592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	46507665	85994724	25044	-0.2278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	85996295	85997281	2	-1.9048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	16	85999992	89379936	1816	-0.236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	987221	49147686	20025	-0.0605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	49153764	58799801	5671	0.4845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	58802859	58803059	2	-0.9685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	17	58807823	80917016	11265	0.4945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	18	329586	77109240	42617	-0.0625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	19	284018	58878226	23925	-0.0634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	20	455764	62219837	37243	-0.0664
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	21	15347621	47678774	20572	-0.0644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	22	17423930	30953295	5308	-0.0581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	22	30953521	30954075	2	-1.4605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	22	30955878	49331012	11595	-0.0582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	3157107	11721209	2484	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	11721459	11722497	2	-3.7532
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	11722528	12891960	874	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	12892648	12897021	8	-1.5299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	12897189	47674487	16684	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	47674903	47682023	5	-3.6327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	47683824	87244609	13740	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	87245088	87251139	3	-2.2975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	87251435	107744291	8145	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	107744335	107745038	2	-3.0959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_C09_896596	X	107746431	154905589	21530	0.0067
