Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	1	3208470	38486066	18610	0.044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	1	38486469	38489455	2	-1.0602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	1	38490652	245880329	110369	0.1431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	474222	24592440	15371	-0.1632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	24592914	24593878	3	-1.5571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	24596868	37433615	6787	-0.1648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	38125936	49211178	6925	0.1117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	49212058	49213180	4	-0.7805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	49218076	53163930	2069	0.1052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	53166535	53192114	22	0.6349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	53193544	204109563	76813	0.1043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	204118925	204129529	5	-1.1317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	204133843	212925224	5402	0.1088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	212925942	212926641	2	-1.2927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	2	212927040	242124735	17763	0.1043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	526235	7842986	3037	0.0894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	7848731	7849159	2	-1.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	7850549	126494752	65559	0.0535
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	126499031	126499853	4	-0.8535
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	126502529	190712898	33772	0.0566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	190715289	190715309	2	-1.1037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	3	190715335	199023074	3904	0.0503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	4	1043934	71192298	38184	0.0468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	4	71196206	71313237	68	-0.8019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	4	71314780	189836143	64395	0.0483
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	5	967233	180293075	100398	-0.076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	959281	67832215	36755	0.2229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	67834987	67835248	3	-0.7336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	67842385	76253570	4870	0.231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	76259064	80245861	2061	-0.1561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	80417795	81159044	418	0.2342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	81159203	85100523	2251	-0.1564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	85101002	85186805	80	0.2161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	85187507	134943914	28556	-0.1553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	134946008	134946217	2	-1.7144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	6	134946712	170745844	21378	-0.1543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	7	671810	158077879	81284	0.2179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	8	607667	50828579	26163	-0.1614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	8	50831764	50832699	2	-1.9513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	8	50835487	145304484	55244	-0.1561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	9	779932	126129596	60967	-0.1536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	9	126129943	126137797	3	-1.8081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	9	126141634	140058573	6961	-0.1801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	405240	55230630	31621	-0.1593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	55230716	55251669	22	-1.0264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	55254804	63129402	4700	-0.1507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	63130653	63131135	2	-1.6403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	63132811	64124790	651	-0.152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	64137021	64359091	157	-0.675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	64360089	75348830	6100	-0.159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	75356239	75515949	82	0.4766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	75517917	133718894	37019	-0.1521
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	133719586	133719622	2	-1.5937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	10	133720789	135075077	379	-0.1865
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	11	446120	12147271	6857	-0.1611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	11	12148237	12149047	2	-2.2907
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	11	12149199	133647740	70274	-0.1549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	12	760163	37518723	19553	0.0528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	12	37520177	113255819	44628	-0.1464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	12	113255951	113256663	2	-1.9174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	12	113259784	131671419	9673	-0.1514
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	13	18348806	114005560	56612	0.2097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	14	19571208	105059083	49378	-0.1569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	15	21238778	80138919	33153	-0.1563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	15	80139255	99701830	11312	0.1086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	16	593460	8703370	3799	0.1966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	16	8705109	9973287	927	-0.1495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	16	9973825	58196280	17742	0.13
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	16	58197121	58198571	2	-1.1025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	16	58199123	87907437	18365	0.0436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	17	933971	21045219	9549	-0.1731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	17	21049743	21051024	3	-1.0513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	17	21053497	78510305	27409	0.0329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	18	319586	14650482	8205	-0.1427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	18	16943745	17219520	110	0.3781
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	18	17225143	75210228	34284	-0.1417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	19	235018	63570038	23935	0.1637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	20	403764	34683964	19341	0.1987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	20	34684764	34729672	21	0.6934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	20	34739516	53571775	12514	0.1893
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	20	53571835	53571849	2	-0.9364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	20	53572113	61690281	5391	0.1938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	21	14269492	46503202	20567	0.0484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	22	15803930	47717016	16909	0.0497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	X	3167107	144380041	59328	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	X	144380505	144381645	3	-1.5106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D01_896550	X	144382096	154558783	4393	0.0025
