Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	3208470	84984614	46618	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	84986488	84993425	16	-1.1728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	84996846	245880329	82382	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	474222	176757436	94075	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	176765822	176871324	68	0.5335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	176871680	176922846	27	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	176928290	176999015	30	-1.0858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	177000920	230966859	30528	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	230973595	230974522	2	-1.3725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	230975887	242124735	6498	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	3	526235	192762797	103804	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	3	192767319	192767373	2	-1.7276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	3	192767394	199023074	2525	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	4	1043934	112431655	61558	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	4	112432291	112436250	2	-2.0814
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	4	112437259	189836143	41134	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	5	967233	180293075	100458	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	6	959281	170745844	96438	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	7	671810	158077879	81281	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	8	607667	50340881	25977	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	8	50343111	50350053	4	-0.9685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	8	50350944	145304484	55518	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	9	779932	122444942	58722	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	9	122446118	122449326	2	-1.297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	9	122451966	140058573	9259	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	10	405240	135075077	80828	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	11	446120	118912856	67002	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	11	118913214	118913230	2	-1.3799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	11	118914006	133647740	10218	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	12	760163	131671419	73926	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	13	18348806	114005560	56619	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	19571208	25064592	2415	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	25065074	25065750	2	-3.6001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	25066700	89475326	37749	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	89475755	89476406	3	-1.3879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	89479106	101711859	8003	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	101714558	101714928	2	-1.2531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	101719204	105059083	1250	-0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	15	21238778	99701830	44513	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	16	593460	87907437	40851	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	17	933971	5360473	1909	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	17	5364766	6566109	866	0.5831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	17	6571160	78510305	34200	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	319586	5948901	2983	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	6593954	6594731	3	-0.8951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	6600812	13351549	4662	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	13358123	13359438	2	-1.3673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	13359574	66156830	30686	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	66157599	66157677	2	-1.2983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	66157721	75210228	4308	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	19	235018	63570038	23940	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	20	403764	61690281	37269	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	21	14269492	46503202	20576	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	15803930	23936665	1652	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	23936861	23936874	2	-1.0492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	23937785	36301712	8430	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	36307125	36311958	8	-1.2306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	36318134	47717016	6826	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	X	3167107	154558783	63639	0.0066
