Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	3218610	85212026	46680	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	85213900	85220837	16	-1.1728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	85224258	112654930	16214	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	112655595	112658524	5	-1.0461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	112658790	192416200	30912	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	192418808	192420628	5	-1.0335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	1	192420897	247813706	35240	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	484222	177049190	94066	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	177057576	177163078	68	0.5335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	177163434	177214600	27	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	177220044	177290769	30	-1.0858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	177292674	231258615	30528	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	231265351	231266278	2	-1.3725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	2	231267643	242476062	6499	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	3	2212571	197538677	106324	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	4	1053934	112212206	61559	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	4	112212842	112216801	2	-2.0814
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	4	112217810	188763651	41138	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	5	914233	180360469	100458	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	6	1014281	170903919	96447	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	7	705284	158385118	81282	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	8	617667	50178328	25978	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	8	50180558	50187500	4	-0.9685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	8	50188391	145232496	55524	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	9	789932	123405121	58734	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	9	123406297	123409505	2	-1.297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	9	123412145	140938752	9259	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	10	415240	135225087	80826	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	11	456120	119407646	66992	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	11	119408004	119408020	2	-1.3799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	11	119408796	134142530	10218	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	12	889902	133161346	73921	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	13	19450806	114987458	56615	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	20501368	25994752	2415	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	25995234	25995910	2	-3.6001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	25996860	90405573	37747	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	90406002	90406653	3	-1.3879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	90409353	102642106	8003	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	102644805	102645175	2	-1.2531
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	14	102649451	105988038	1250	-0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	15	23687685	101884307	44511	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	16	653459	89379936	40785	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	17	987221	5419749	1909	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	17	5424042	6625385	866	0.5831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	17	6630436	80917016	34200	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	329586	5958901	2985	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	6603954	6604731	3	-0.8951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	6610812	13361549	4662	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	13368123	13369438	2	-1.3673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	13369574	68005850	30681	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	68006619	68006697	2	-1.2983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	18	68006741	77109240	4308	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	19	284018	58878226	23940	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	20	455764	62219837	37272	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	21	15347621	47678774	20575	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	17423930	25606665	1652	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	25606861	25606874	2	-1.0492
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	25607785	37971766	8429	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	37977179	37982012	8	-1.2306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	22	37988188	49331012	6826	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D06_896514	X	3157107	154905589	63657	0.0066
