Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	1	3218610	247813706	128989	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	2	484222	242476062	131146	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	3	2212571	82755371	47342	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	3	82755992	82756177	2	-1.749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	3	82758743	89556027	3251	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	3	89562587	89563874	3	-1.4203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	3	89570685	197538677	55683	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	4	1053934	24064621	14270	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	4	24065895	24067796	3	-1.4162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	4	24070552	188763651	88370	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	5	914233	180360469	100415	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	6	1014281	115227127	63612	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	6	115244168	115251728	2	-2.938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	6	115257634	170903919	32788	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	7	705284	158385118	81251	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	617667	23229458	12835	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	23239367	23240650	6	-0.9736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	23242026	53893530	15167	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	53897216	53897326	2	-1.2192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	53901286	79518376	15118	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	79520944	79522152	2	-1.3903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	8	79523685	145232496	38333	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	9	789932	140938752	67968	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	415240	12419795	8336	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	12420214	12424875	3	-0.9736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	12430336	18814194	4794	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	18817509	18820106	4	-1.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	18821074	30840200	8044	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	30840526	30842357	3	1.4185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	10	30842890	135225087	59606	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	11	456120	134142530	77176	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	12	889902	54987545	27982	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	12	54990463	54995872	7	-1.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	12	54997372	82009775	16429	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	12	82011500	82118805	63	-1.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	12	82128250	133161346	29397	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	13	19450806	114987458	56588	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	14	20501368	46590910	13190	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	14	46592058	46592177	2	-1.802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	14	46592900	105988038	36200	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	15	23687685	33617186	3819	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	15	33617533	33618510	2	-1.4908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	15	33618819	101884307	40657	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	16	653459	89379936	40763	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	17	987221	11206875	5388	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	17	11207072	11207109	2	-1.8037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	17	11209538	80917016	31564	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	329586	5275277	2523	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	5282442	5282665	2	-1.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	5290198	5958901	458	-0.0222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	6603954	6604731	3	-1.0657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	6610812	8416858	1344	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	8416950	8416997	2	-1.0989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	8419335	8585211	164	0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	8585336	8585711	2	-1.718
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	8587109	73613302	35941	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	73613380	73613599	2	-1.7761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	18	73615115	77109240	2177	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	19	284018	58878226	23933	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	20	455764	62219837	37255	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	21	15347621	47678774	20569	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	22	17423930	49331012	16903	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	3157107	22212700	7781	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	22212765	22212996	2	-1.238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	22213994	40600501	9118	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	40603422	40605823	5	-0.9332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	40607069	112127721	27489	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	112128669	112130137	3	-0.998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D08_896446	X	112131677	154905589	19381	0.0055
