Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	61735	768793	52	0.335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	777122	9589413	4801	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	9596481	9596865	2	-1.3227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	9602373	12873385	1702	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	12877057	13375968	25	0.5062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	13376017	16895627	2154	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	16896821	17012456	51	0.3507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	17012741	17048479	24	0.733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	17056457	17182437	23	0.2535
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	17190004	17286210	69	0.5095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	17286319	35091674	10264	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	35102654	35104491	20	-0.5859
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	35114268	72768498	23865	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	72768916	72811148	46	-1.2716
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	72811904	104103230	20061	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	104109238	104303403	55	0.6602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	104303501	112690326	5580	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	112695965	112697012	18	0.4705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	112697174	120527395	5069	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	120540804	120558480	6	0.8465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	120563977	121089508	38	0.1559
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	121120602	121127900	2	0.7983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	121129349	147823776	1212	0.1098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	147824176	149209322	169	0.3283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	149209360	149246326	17	0.7443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	149246380	149545386	45	0.322
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	149548713	149617451	4	1.7945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	149617488	152555527	1486	0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	152555706	152586238	31	1.4924
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	152586278	152759678	175	0.0205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	152761923	152768700	37	0.5874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	152773905	167764835	10225	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	167766183	167766919	4	-1.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	167768513	169216937	1113	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	169233974	169241766	7	0.5787
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	169242401	174796405	3526	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	174796556	174801737	15	-0.7621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	174801840	189547638	9842	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	189549597	189552536	4	-0.8073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	189552857	189648157	75	-0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	189648483	189648527	2	-1.4097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	189652047	196704997	4727	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	196705046	196895681	172	0.2304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	196895847	213004455	10714	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	213005012	213010436	7	-1.3218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	213014453	228952273	10483	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	228956459	228959039	4	-0.913
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	228962427	243044281	10829	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	243044307	243280885	107	0.2888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	243282484	247966095	3129	0.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	247967505	247976108	15	-1.2937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	1	247980676	249224388	609	0.0702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	12784	4205687	2987	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	4213864	4222703	35	0.3291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	4223167	34675467	21083	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	34681494	34701735	10	0.6375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	34708632	34717908	23	0.3213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	34717974	34737057	17	0.8034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	34737163	40332851	4057	0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	40335410	40335876	3	-1.1104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	40336640	45317898	3718	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	45318465	45319505	3	-1.2657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	45319882	52743925	5265	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	52754468	52781542	40	-0.6861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	52787949	71839826	12600	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	71843890	71846209	2	-1.2921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	71847120	87361172	9423	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	87373893	87409373	9	-0.8634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	87412880	87875620	158	-0.3823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	87878405	87996372	18	-0.7875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	88024667	90262407	825	0.0669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	90262898	92090885	99	0.3798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	92095238	97734957	860	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	97744348	97794344	20	-0.8018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	97795817	97949121	51	-0.1475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	98013814	98161710	23	-0.9094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	98162189	106874649	5576	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	106874722	106885357	13	0.606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	106887255	110462496	2112	0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	110467473	111144826	102	0.6797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	111169128	123526105	7399	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	123526388	123526710	2	-1.4761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	123535456	146862085	14337	0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	146864404	146866934	24	0.6145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	146877806	235614153	54575	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	235620595	235620768	2	-1.5134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	2	235622041	243089456	4581	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	60345	26613201	20077	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	26614974	26614985	8	0.9031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	26615949	36394658	6590	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	36399248	36416585	15	-0.9097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	36419956	68746164	21174	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	68746259	68747413	14	-1.4481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	68748758	75421170	4875	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	75427107	75827610	130	0.2656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	75831632	162532950	50092	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	162534730	162536583	2	2.2881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	162536823	175080611	7717	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	175080747	175081226	4	-1.1426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	175081325	180476283	3356	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	180477295	180477503	2	-1.8689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	180479157	192877902	8172	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	192877962	192882903	19	-1.3027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	192886435	195446922	1515	0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	195455508	195456048	8	0.7303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	3	195456889	197896118	1183	0.0396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	12281	65978	57	0.4712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	66719	2484643	927	0.0237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	2486276	2486486	2	0.9075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	2487366	3897744	659	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	3900852	4176629	78	0.6839
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	4177173	10210390	4083	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	10214160	10231498	29	-2.2413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	10234214	10235268	7	-0.754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	10236142	10393154	173	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	10398318	10400668	14	0.5873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	10402718	25556580	11027	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	25557047	25578269	18	1.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	25585383	34786500	5768	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	34786955	34821340	35	-0.4565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	34824183	49154769	8979	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	49161758	49590656	24	0.4322
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	49620885	64693940	7587	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	64697469	64708258	29	0.4178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	64716431	69244434	2855	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	69255070	69256759	3	-1.3086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	69256760	69374955	27	0.0859
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	69375160	69582483	74	0.5503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	69591612	70389716	482	0.0568
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	70389861	70390779	2	1.2869
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	70391888	86975223	10336	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	86976094	86979764	19	-0.7045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	86979944	130195588	25734	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	130197796	130198465	2	-1.7965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	130199565	165650618	21721	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	165650631	165658643	8	-0.6482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	165661151	165968118	198	0.0495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	165968273	165968538	2	-1.1252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	165969728	172987928	4404	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	172989148	172989533	12	0.7819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	172995979	173428471	237	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	173428588	173428643	2	1.5517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	173441132	176699362	1841	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	176700366	176700465	2	-1.4708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	176700569	183568672	5050	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	183571340	183573768	6	-0.6873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	183574372	190778266	4922	0.0315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	4	190778534	191027923	65	0.2681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	15532	17458474	13388	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	17462329	17655339	57	-0.9862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	17663105	54944262	20791	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	54944270	54948733	2	-1.5195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	54949189	57321646	1662	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	57326027	57333533	32	-0.522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	57338357	128879157	43695	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	128881010	128881175	3	-1.5198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	128882328	133032133	2347	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	133032214	133048578	9	-1.2882
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	133053691	151514171	11639	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	151515386	151520271	15	-0.5453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	151520422	162487856	7348	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	162488010	162502574	3	-1.1546
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	162511365	165838874	2203	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	165839662	165849955	34	-1.0843
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	165850050	177198449	7916	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	177227551	177232605	3	2.4284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	177254965	180378710	1815	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	180378888	180417207	14	0.69
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	5	180417614	180790320	175	0.0566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	149661	29837072	21748	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	29837187	29849267	16	0.9276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	29850196	29874808	8	-0.027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	29876959	29898897	8	-0.8025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	29899677	32454523	1179	0.0413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	32456683	32508476	15	1.4463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	32509283	32602107	36	0.3874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	32602269	33938743	825	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	33942011	33944586	7	-1.0968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	33944623	35752792	948	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	35756850	35757078	3	1.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	35757299	48287802	8283	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	48289514	48289633	2	-1.3796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	48295189	53931151	3696	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	53931230	53931855	6	1.514
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	53935348	58472734	2448	0.0241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	58473479	58474000	2	-1.1392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	58479692	65336942	1908	0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	65347544	65348992	2	1.1745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	65350776	66399482	700	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	66399537	66403852	23	-0.6717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	66407127	74592225	5443	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	74592457	74597341	8	-2.9427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	74601410	77014948	1471	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	77016900	77016926	3	1.2223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	77016993	77436532	296	0.0256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	77439868	77452641	18	0.4125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	77452673	78971712	985	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	78971781	79035185	108	0.3386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	79039234	95967356	10764	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	95968991	95969875	3	-1.0205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	95978113	103734829	4717	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	103737976	103762061	46	-1.4016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	6	103765470	171051005	44263	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	43355	5936900	3074	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	5940039	5948828	2	-1.4249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	5950828	6830936	359	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	6833877	7050775	73	0.3044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	7052237	14727127	6371	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	14730701	14730823	3	-1.1455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	14733495	62020156	30848	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	62049430	62716091	254	0.6222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	62720216	63112016	46	0.2817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	63112265	64594065	688	0.0398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	64594341	64595104	3	1.0528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	64595118	64951818	177	0.1104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	64958622	65060564	22	0.4971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	65066173	77171814	5691	0.0232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	77171954	77178113	3	-1.1357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	77178637	91208142	9267	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	91218884	91219132	3	-1.2069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	91225032	97407061	3890	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	97417607	97417610	2	-1.6797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	97420649	109437680	6625	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	109437757	109453910	22	0.654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	109453982	113650966	2607	0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	113653471	113653782	2	-1.2825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	113657680	126045556	7434	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	126045651	126046615	10	-1.5033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	126046876	141755195	9936	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	141757591	141792107	50	0.339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	141795281	142474939	451	0.0759
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	142476719	142486345	29	0.943
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	142486495	143873377	835	0.0252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	143873952	144050933	43	0.5484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	144051231	154389895	6450	0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	154393171	154399613	4	-2.2337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	154400830	154965392	572	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	154966514	154967008	11	0.4603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	154967105	155464029	335	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	155465863	155466938	2	1.6568
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	155469636	155478739	3	-1.0262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	155478986	159046949	2249	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	7	159047467	159127004	74	0.2936
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	31254	594973	329	0.0751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	595220	595474	3	-1.0884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	595693	4002068	3459	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	4002192	4002316	4	-1.7006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	4002653	5598735	2303	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	5598764	5603900	18	-3.2382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	5603914	5603986	3	-1.2156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	5604007	6840297	1615	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	6858815	6876142	4	1.5312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	6878188	8055260	332	0.2509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	8070303	11859740	3218	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	11861809	12562455	163	0.3643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	12562992	24972187	10394	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	24974443	24984333	27	0.6455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	24991104	25410206	316	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	25415204	25415269	2	-1.1975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	25415450	33764588	5733	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	33764921	33765747	3	-2.1193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	33769792	39230325	2980	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	39230659	39386965	60	0.8344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	39388299	40944012	1173	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	40947391	40947834	2	1.3972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	40949654	59958579	9385	0.0179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	59961589	59964528	2	-1.3091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	59965200	115632043	33339	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	115634487	115638701	17	-0.6953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	115638838	115640817	5	0.4645
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	115640908	115641689	12	-0.6621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	8	115641731	146298155	21080	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	46587	186580	22	0.3929
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	192129	5078443	5229	0.025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	5079156	5081766	9	0.6999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	5081852	23361805	15205	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	23363115	23373484	8	-2.7132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	23378488	43187967	10923	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	43315670	43800186	41	0.9022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	44114872	69941942	434	0.2544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	69941943	75280611	3304	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	75284559	75285069	3	-1.2224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	75285903	95324197	14211	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	95337520	95345702	5	-0.8508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	95346258	105813170	6877	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	105822396	105863188	24	0.6382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	105864747	115777153	7601	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	115778270	115781111	4	-1.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	115781317	128969465	9500	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	128975311	128984687	23	-0.4628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	128984831	129251893	196	-0.0216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	129255391	129255846	3	-0.8237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	129257001	138211368	5221	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	138214105	138215622	2	-1.6395
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	138216412	138294078	67	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	138302726	138306350	2	-0.8706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	138308725	140252947	631	0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	140255642	140255833	3	-1.3175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	140273003	141045894	404	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	9	141054761	141091394	9	0.5972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	72759	2091021	1504	0.0223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	2092776	2093707	3	-1.3261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	2095066	3008947	906	0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	3009063	3010592	3	-1.0822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	3010664	42623158	26793	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	42626948	42767643	24	0.5151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	42782884	47771030	2724	0.0253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	47897394	47948060	4	1.2755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	47960476	49241492	310	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	49270823	49287591	3	-2.3038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	49287603	51197138	1354	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	51231576	51397071	3	-1.2049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	51449369	51822399	96	0.1446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	51830360	51891920	5	-2.1034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	51903768	67307936	11025	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	67307951	67314430	25	0.6024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	67314446	122316099	36544	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	122316317	122316324	2	-1.5859
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	122317332	134741117	9463	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	134741143	134917297	70	1.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	134921135	135423087	235	0.0361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	10	135424095	135506704	15	0.3402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	198510	733639	175	0.0556
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	733813	742508	4	0.6163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	743020	1644440	305	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	1644905	1650047	7	-0.7703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	1650539	3449438	850	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	3449682	3529938	18	0.4024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	3530671	4262573	438	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4268620	4272420	4	0.6992
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4272462	4624174	302	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4624432	4625020	3	-1.1182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4626090	4967650	372	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4968117	4976272	31	-1.6743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4976334	4976907	12	-0.4416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	4977011	5783923	784	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	5787405	5809338	34	-0.5082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	5809461	55374048	31323	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	55374188	55453576	58	0.3997
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	55460683	67472905	6239	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	67475601	67749322	77	0.3001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	67764080	124771531	38338	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	124775987	124777418	3	-2.3933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	124788668	133119503	6433	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	133120937	133123507	2	-1.1802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	11	133124218	134944770	1343	0.0427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	150442	192220	9	0.5963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	192620	869198	411	0.0389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	869263	874029	16	-0.8204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	875354	1433231	308	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	1436978	1437740	2	-1.0934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	1438027	8419654	4829	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	8420824	8584672	68	0.3507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	8594894	9633870	564	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	9637909	9728292	24	1.0573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	9734969	11219423	1043	0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	11220724	11241532	12	1.0189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	11251874	27645992	11388	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	27647741	27651362	28	-0.6915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	27657161	31906672	3154	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	31907274	31909908	4	-1.5805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	31917220	34683348	1808	0.0307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	34697246	34697262	2	-1.1685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	34697307	38207042	128	0.1389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	38219293	38219777	3	-1.0891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	38268840	90483350	32031	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	90491669	90492074	7	0.7514
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	90493557	99791814	6455	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	99795293	99797809	21	0.3939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	12	99797918	133778189	22779	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	19026949	23629210	2899	0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	23632678	23633515	12	-0.4516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	23638195	25035607	1145	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	25039590	25039598	3	-1.127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	25039678	38070370	9512	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	38071135	38084543	15	-0.5491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	38084732	44827881	4839	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	44829170	44835442	8	-1.061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	44836037	53071152	5063	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	53074912	53160234	18	0.3827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	53173313	72892010	12008	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	72894837	72898528	4	-0.9951
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	72898580	114987333	28743	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	13	114987458	115108397	51	0.2544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	19002124	19604114	44	0.2934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	19607007	20413858	138	-0.4402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	20417541	41602894	13639	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	41606851	41606886	3	-1.3143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	41606899	42855165	783	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	42855466	42855717	3	-1.1283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	42856976	70018047	17085	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	70018368	70022467	8	-3.0672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	70022713	83955807	9218	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	83958911	83959099	3	-1.1108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	83962729	98153706	9648	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	98154479	98155055	7	-1.0988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	98156589	106547507	4591	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	106548213	106569463	10	1.1746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	106574118	106796697	104	0.2139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	106801355	106802053	4	-0.6658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	14	106815943	107285437	308	0.1323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20016328	20206939	48	0.2774
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20216955	20578421	49	-0.7287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20581451	20581455	5	0.7189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20581562	20586957	14	-0.0704
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20590027	20730465	31	-0.7082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20735423	20843562	11	0.2921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	20847933	21210772	121	-0.6118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	21223683	21302216	12	0.2507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	21905757	22409986	55	-0.4016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	22410032	22587474	73	-0.7238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	22673399	24255244	795	0.0375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	24257931	24258347	2	-2.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	24258571	24669745	209	0.0633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	24674751	24727231	42	-0.373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	24730995	30444276	3635	0.0324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	30448595	30780663	100	-0.2358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	30792569	56789647	16365	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	56790703	56800977	25	-2.1336
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	56801623	76878362	12750	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	76891241	76895775	22	1.0363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	76902179	77185902	133	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	77186726	77194431	3	-0.9983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	77195486	82680099	3516	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	82684935	83108839	15	0.6944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	83169549	85336806	1099	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	85336814	85336945	2	-2.149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	15	85337253	102469040	12918	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	60777	13126471	9909	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	13128258	13128604	4	-1.0763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	13130274	19945650	3622	0.0357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	19945808	19963123	23	0.4282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	19965338	22587465	1306	0.0517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	22588017	22710742	66	0.2931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	22712979	34558514	5672	0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	34558828	34564630	2	-1.2279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	34564759	55796594	6727	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	55798222	55810207	12	1.208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	55816243	78371608	14436	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	78372440	78379675	13	-2.5195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	16	78383140	90287535	10648	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	526	16662914	10511	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	16663051	16741784	14	0.402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	16757147	34436708	7870	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	34437128	34586294	41	0.9432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	34629696	38795943	2125	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	38796945	38797242	2	-0.9676
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	38798021	39423103	419	0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	39423153	39430450	17	-0.6146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	39430531	39529138	117	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	39532869	39536674	7	0.6604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	39547328	43532033	2025	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	43532309	43648540	20	0.3661
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	43655090	44214166	383	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	44215364	44292619	69	-0.3566
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	44292755	44505241	31	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	44523711	44523726	2	2.0333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	44546329	54160914	5847	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	54161009	54172591	26	-1.2499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	17	54172823	81049726	15781	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	18	11543	39150579	23461	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	18	39151059	39162823	12	0.4445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	18	39164485	40051678	603	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	18	40056569	40057471	24	-0.6067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	18	40057767	78015057	26723	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	90910	9273800	3412	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	9274672	9278121	5	-1.0523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	9284760	15824071	3248	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	15824942	15824943	2	-1.0778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	15825598	19831544	1885	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	19835753	19836676	2	1.2668
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	19840768	21710955	1061	0.0952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	21717303	21721674	2	-1.7937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	21722305	21777328	38	0.0402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	21777466	21777706	3	-0.8842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	21779955	21814919	23	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	21815640	21819869	2	1.2387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	21820111	23037947	711	0.0594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	23038335	23047147	2	-1.2892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	23051297	35878380	6463	0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	35880890	35882459	2	-1.4277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	35882487	55326613	10185	0.0299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	55330654	55378449	25	0.4379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	55378521	56282369	436	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	56282535	56283067	3	-3.1298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	56286293	58955556	1804	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	19	58956315	59097854	45	0.2084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	61305	1552503	1185	0.028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	1557190	1579121	52	-0.6624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	1580388	1863025	247	0.0223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	1863198	1864788	3	-1.2845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	1865198	26210619	18536	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	26220136	29648981	99	0.2893
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	29648997	59565245	20586	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	59569025	59590201	49	0.6493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	59590484	62290335	1469	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	62290576	62297556	4	0.4586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	62297802	62913821	268	0.0408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	20	62915568	62956153	7	0.5601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	21	10736871	44968053	22643	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	21	44970873	44972812	2	-3.0775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	21	44973667	48096957	1766	0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	16052528	22474023	3303	0.0609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	22474492	22474613	4	-0.821
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	22481498	22752680	342	0.0671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	22752742	22752880	3	-1.1299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	22757321	24285809	943	0.086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	24288367	24396814	48	0.4681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	24401529	32500058	5822	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	32500263	32500274	2	-1.3751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	32503675	51204648	13091	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	22	51210268	51234455	7	0.8821
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	168477	6449766	3001	-0.028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	6455163	6593672	109	0.9922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	6596639	7514697	643	-0.0248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	7517363	8135657	469	1.1158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	8141089	115617252	56824	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	115618666	115663074	33	1.0507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	X	115664640	155182354	23368	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	2650438	7381168	1416	-0.9993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	7386580	7400746	10	-3.1527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	7401836	9172560	1026	-0.9705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	9191899	9387994	17	-0.3634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	9388262	23626202	4852	-0.9902
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	23631135	23631594	2	0.2916
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D09_896600	Y	23631629	59018259	1309	-0.9101
