Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	3208470	3644547	207	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	3644783	3644803	2	-1.8242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	3645096	181582469	88248	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	181583513	181585037	2	-2.2685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	181586815	243609981	39677	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	243611632	243611767	2	-1.765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	243613021	245880329	928	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	2	474222	235487722	127359	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	2	235490169	235490819	2	-2.2109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	2	235492308	242124735	3907	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	526235	11945970	5754	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	11946322	11947393	2	-1.3925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	11949270	12623496	482	-0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	12623523	12623726	2	-2.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	12623861	155935110	78308	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	155937134	155938898	2	-2.1808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	155939551	199023074	21821	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	4	1043934	125678855	69046	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	4	125679801	125682385	3	-1.7442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	4	125682475	189836143	33665	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	5	967233	180293075	100485	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	959281	25471662	17135	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	25472218	25476914	3	-1.4669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	25476957	45300273	9434	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	45305201	45306961	3	-1.5114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	45310552	170745844	69876	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	7	671810	4858553	1610	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	7	4859139	4862748	2	-2.0731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	7	4866288	158077879	79685	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	8	607667	145304484	81520	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	9	779932	140058573	68011	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	405240	69048546	39696	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	69053507	69059913	6	-1.0831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	69071868	127435867	36866	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	127449470	127449654	2	-2.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	127450413	135075077	4280	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	11	446120	133647740	77253	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	760163	48046366	25327	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	48052676	48052886	2	-1.5553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	48054023	58019971	5406	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	58022467	58022613	2	-1.9081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	58024412	131671419	43200	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	13	18348806	114005560	56637	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	14	19571208	105059083	49439	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	15	21238778	78282719	32022	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	15	78284568	78284837	2	-1.6255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	15	78286930	88579394	5721	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	15	88579490	88580263	2	-1.4248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	15	88583305	99701830	6775	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	16	593460	8053854	3302	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	16	8054268	8057869	2	-1.9545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	16	8058283	87907437	37557	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	17	933971	23069957	9984	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	17	23072535	23074052	2	-1.5763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	17	23074526	78510305	26998	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	18	319586	75210228	42649	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	235018	13909355	4959	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	13912685	13917008	4	-1.2692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	13927302	34450305	5198	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	34450441	34456548	10	0.6455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	34456994	63570038	13775	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	20	403764	61690281	37279	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	21	14269492	46503202	20581	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	22	15803930	47717016	16923	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	3167107	65548871	25122	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	65548955	65549055	2	-2.118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	65549345	96882368	11999	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	96882456	96882552	2	-2.057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	96883142	97490354	367	-0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	97492500	97494950	2	-3.4463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	97495637	144499636	21934	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	144500431	144500995	4	-2.2352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	144503295	154558783	4299	0.0083
