Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	3218610	3654687	207	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	3654923	3654943	2	-1.8242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	3655236	183315846	88306	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	183316890	183318414	2	-2.2685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	183320192	245543358	39675	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	245545009	245545144	2	-1.765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	1	245546398	247813706	928	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	2	484222	235822983	127350	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	2	235825430	235826080	2	-2.2109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	2	235827569	242476062	3908	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	2212571	11970970	5752	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	11971322	11972393	2	-1.3925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	11974270	12648496	482	-0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	12648523	12648726	2	-2.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	12648861	154452416	78305	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	154454440	154456204	2	-2.1808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	3	154456857	197538677	21820	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	4	1053934	125459405	69050	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	4	125460351	125462935	3	-1.7442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	4	125463025	188763651	33666	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	5	914233	180360469	100485	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	1014281	25363683	17136	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	25364239	25368935	3	-1.4669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	25368978	45192295	9434	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	45197223	45198983	3	-1.5114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	6	45202574	170903919	69884	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	7	705284	4892027	1610	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	7	4892613	4896222	2	-2.0731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	7	4899762	158385118	79686	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	8	617667	136927455	77553	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	8	136927699	136929416	2	-1.6149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	8	136932922	145232496	3972	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	9	789932	140938752	68023	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	415240	69378540	39696	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	69383501	69389907	6	-1.0831
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	69401862	127445877	36864	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	127459480	127459664	2	-2.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	10	127460423	135225087	4280	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	11	456120	39761294	24740	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	11	39762631	39767475	2	-1.6942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	11	39775097	134142530	52501	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	889902	59733704	30730	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	59736200	59736346	2	-1.9081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	12	59738145	133161346	43200	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	13	19450806	114987458	56633	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	14	20501368	105988038	49437	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	15	23687685	101884307	44520	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	16	653459	8113853	3302	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	16	8114267	8117868	2	-1.9545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	16	8118282	89379936	37491	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	17	987221	26045830	9984	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	17	26048408	26049925	2	-1.5763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	17	26050399	80917016	26998	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	18	329586	77109240	42646	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	284018	14048355	4959	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	14051685	14056008	4	-1.2692
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	14066302	29758465	5198	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	29758601	29764708	10	0.6455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	19	29765154	58878226	13775	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	20	455764	62219837	37282	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	21	15347621	47678774	20580	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	22	17423930	49331012	16922	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	3157107	65632146	25129	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	65632230	65632330	2	-2.118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	65632620	96995712	12003	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	96995800	96995896	2	-2.057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	96996486	97603698	367	-0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	97605844	97608294	2	-3.4463
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	97608981	144691944	21941	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	144692739	144693303	4	-2.2352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D10_896502	X	144695603	154905589	4298	0.0082
