Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	1	3218610	76306660	41289	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	1	76306738	76310488	2	-1.4142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	1	76311291	180748317	45416	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	1	180750573	180753483	4	-1.5152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	1	180755661	247813706	42397	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	2	484222	211634902	112473	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	2	211635258	211638684	5	-1.2414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	2	211645979	242476062	18761	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	3	2212571	197538677	106359	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	4	1053934	61327312	33520	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	4	61329994	61331617	2	1.2609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	4	61335564	136858054	40973	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	4	136860738	136864671	2	-2.0738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	4	136864967	188763651	28215	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	5	914233	180360469	100477	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	1014281	124255378	68316	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	124256465	124257343	5	-1.1299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	124261314	129236667	2867	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	129236954	129242210	3	-1.2339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	129244994	134902221	3855	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	134904315	134904524	2	-1.1261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	134905019	135335429	285	-0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	135342254	135343238	2	-1.0585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	135349570	137654892	1537	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	137655848	137655891	2	-1.4833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	137657982	148501944	6412	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	148506612	148506944	2	-1.7211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	6	148507255	170903919	13171	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	7	705284	127504576	65079	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	7	127506080	127506662	2	-1.5725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	7	127507991	145192317	9370	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	7	145192718	145192893	2	-1.6867
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	7	145192945	158385118	6842	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	8	617667	114962991	62600	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	8	114980457	115054145	52	-0.9378
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	8	115059348	122379293	4577	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	8	122379472	122387090	2	-1.4793
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	8	122388087	145232496	14279	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	9	789932	1738753	400	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	9	1740278	1740718	4	-1.3675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	9	1742582	140938752	67613	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	10	415240	135225087	80842	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	11	456120	134142530	77229	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	12	889902	133161346	73922	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	13	19450806	114987458	56628	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	14	20501368	105988038	49436	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	15	23687685	101884307	44520	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	16	653459	89379936	40788	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	987221	31760760	12789	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	31766241	31768663	3	-1.0624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	31768958	53763053	9950	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	53768619	53776506	15	-1.2328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	53780520	54849496	874	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	54850166	54850329	2	-1.1464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	54853838	79209107	12800	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	79247798	79248320	2	-1.3468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	79253402	80571505	356	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	80571695	80571933	2	1.2024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	17	80572628	80917016	183	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	18	329586	46944134	25459	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	18	46944484	46952654	3	-1.3615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	18	46953239	77109240	17182	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	19	284018	58878226	23948	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	20	455764	62219837	37278	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	21	15347621	47678774	20579	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	22	17423930	45447969	14125	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	22	45448185	45448770	2	-1.426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	22	45449110	49309527	2770	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	22	49310402	49310411	2	-1.1852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	22	49310467	49331012	20	-0.0617
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	X	3157107	146867073	60801	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	X	146868593	146868655	2	-3.3988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D11_896462	X	146868749	154905589	2906	0.0033
