Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	51598	25455878	14168	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	25455928	25519533	28	0.5037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	25519573	72541086	28786	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	72541504	72583736	46	-1.2497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	72584492	81661190	5791	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	81661193	81661255	2	-1.4654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	81661269	86545634	3397	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	86549410	86550854	2	-1.5591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	86552670	111178891	15404	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	111179088	111189749	38	-0.6783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	111193590	112491849	1078	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	112497488	112498721	21	0.4118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	112498736	150822151	8047	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	150822330	150852862	31	-0.717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	150852902	151026302	175	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	151028547	151035324	37	-1.2627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	151040529	194998709	29565	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	195005246	195082414	92	-0.4507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	195083353	208137685	8825	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	208148236	208160117	5	0.9971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	208160194	221087127	8958	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	221089546	221090392	3	-1.6448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	221093340	247191011	18180	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	2784	34506083	24106	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	34506375	34594261	63	0.4762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	34594303	41091739	4827	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	41091947	41099391	23	-0.5305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	41104737	52607972	8197	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	52607984	52635046	39	-0.5873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	52641453	76695822	15566	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	76697974	76698934	6	-0.9414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	76701094	86981712	6446	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	86982714	86990896	2	-1.6344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87015364	87299468	69	0.1133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87302231	87753000	136	0.404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87755578	105714544	7005	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	105714637	105717643	8	-0.8635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	105720570	146578555	24417	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	146580874	146583404	24	-1.6349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	146594276	159666866	7797	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	159668589	159669219	2	-1.9845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	159671533	184501477	15510	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	184502045	184510686	19	-0.4758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	184516834	195068855	5923	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	195073720	195074764	5	-1.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	195083754	203605142	4853	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	203608045	203610291	3	-2.5204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	203612385	212889567	5952	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	212894794	212900371	26	-0.8726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	212900403	215431551	1623	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	215437995	215439066	2	-1.9074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	215439435	227050282	7642	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	227051032	227054312	4	-2.5121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	227056043	242738129	9804	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	35345	65163493	45402	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	65164275	65185492	53	-0.5473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	65191389	68828949	2426	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	68828974	68830103	13	-1.1616
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	68831448	75651239	4939	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	75655239	75669495	5	-1.4851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	75677871	99391815	10418	-0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	99396115	99397507	2	-1.5872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	99398638	120833035	13281	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	120834088	120836628	5	-0.9983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	120838101	164007552	26455	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	164011324	164023184	10	0.9156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	164028410	176563305	7713	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	176563441	176563920	4	-2.9939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	176564019	194357441	11530	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	194360596	194365597	20	-1.0756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	194369129	196766953	1486	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	196767187	196959853	46	-0.5036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	196960434	199380515	1174	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	2281	9061021	5248	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	9066075	9088443	10	1.2489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	9095185	9819488	546	-0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	9823258	9840596	29	-1.5874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	9843312	9999813	178	-0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	10001452	10009766	16	0.5183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	10011816	34463350	16815	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	34463385	34497735	34	0.6367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	34500578	64376535	16594	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	64380064	64390200	22	-0.8936
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	64390349	64390853	6	-2.9797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	64399026	68967186	2862	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	68970733	68970737	3	-1.2665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	68977394	69057550	14	0.051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	69057755	69168574	63	0.4426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	69171930	100512085	18740	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	100512220	100515475	3	-1.5663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	100518125	130282201	17770	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	130286996	130287610	2	-2.5744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	130292013	162093375	19307	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	162093390	162104358	23	-0.5641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	162104369	173658882	7326	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	173658897	173665218	11	0.6076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	173677707	191261904	11887	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	68532	720509	301	0.0628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	723745	853686	42	0.4275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	853839	12872313	9885	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	12872375	12891533	11	-1.2418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	12902201	57357403	25673	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	57361784	57369290	32	1.8327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	57374114	68882059	7306	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	68903050	69153891	5	1.5487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	69269183	106255426	20980	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	106257572	106260999	19	-0.7422
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	106261016	151494364	29382	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	151495579	151498544	14	-1.8776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	151500464	180307129	19322	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180311316	180365870	21	0.5259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180375006	180451371	58	0.0774
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180453416	180465596	5	-0.6932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180465614	180722926	106	0.0505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	94661	199283	101	0.031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	202353	236082	18	0.6177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	239286	26840370	20165	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	26840385	26870551	19	0.4472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	26870617	29945167	1447	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	29945293	29958175	15	-1.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	29958253	32562501	1193	0.0565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	32564661	32710085	51	-0.528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	32710247	54039378	13766	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	54039762	54039814	2	-1.6551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	54043307	65767450	4597	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	65768120	65770513	3	-2.4199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	65774105	66450811	457	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	66456203	66463848	25	-0.6709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	66463931	74648953	5445	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	74649185	74654069	8	-2.5672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	74658138	77478101	1760	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	77478211	77525815	38	0.3042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	77526970	79028431	976	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	79028500	79098352	110	-0.5235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	79098438	81341435	1433	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	81341478	81346253	28	-0.9039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	81351060	160952555	51060	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	160952709	160953273	5	0.989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	160988032	170892930	7270	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	52911	26098815	18874	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	26108917	26111938	4	-3.1715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	26113744	54347867	19703	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	54353999	54354011	6	1.321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	54360982	142154515	49324	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	142156294	142165614	27	-1.9721
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	142165684	143540378	844	-0.0264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	143542557	143734050	46	0.3731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	143734848	145853110	1313	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	145853216	145853798	2	1.3441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	145857364	152458453	3992	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	152460839	152461575	2	-1.6621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	152462083	152778571	265	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	152778578	152778645	2	-2.3107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	152778648	153030098	217	0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	153030321	153030353	2	-1.3684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	153031748	158819765	3896	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	21254	7174042	7833	0.0272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7174056	7225429	26	-0.5319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7237790	7980592	177	0.2659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7980818	7999869	7	-1.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	8000007	12284533	3287	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	12284553	12464336	81	0.3065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	12464461	16303983	3543	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	16306606	16326958	30	-0.7113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	16327712	25032558	6877	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	25032592	25035889	11	-0.5386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	25035904	33884463	6058	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	33884668	33885289	2	-2.1541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	33889334	143463586	67089	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	143463787	143471833	3	-1.5177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	143480866	146268959	964	0.0345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	36587	592903	511	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	596699	596961	4	-1.8046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	597307	24493816	20755	0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	24494125	24507682	19	-2.7523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	24509684	41723631	10068	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	41832529	41968375	8	-0.96
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	41975187	43177963	25	0.053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	43255666	43740182	41	0.5494
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	44054868	45297611	120	-0.0332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	45338610	45639014	17	-0.4977
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	45639104	89712414	14578	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	89743971	89744039	2	-2.0434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	89747777	97289908	5058	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	97290019	97290380	4	0.9833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	97290779	112064263	10673	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	112064610	112067990	2	-3.0543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	112072252	140211215	18062	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	62759	4280814	3588	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	4280838	4280924	2	2.1583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	4281016	6451221	1834	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	6451363	6451487	5	0.9248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	6458760	18213969	9474	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	18225129	18239819	3	-2.3354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	18263653	20893207	2142	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	20893278	20893509	2	-1.5683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	20893540	24412311	2197	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	24412763	24418060	13	0.7796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	24418914	46111486	12335	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46337321	46363383	5	-1.3228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46366714	46415426	47	0.092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46415480	46520662	83	0.3973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46522729	66976282	13030	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	66977929	66984436	27	0.5352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	66984452	135356694	46334	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	188510	4924226	2479	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	4924693	4932910	32	0.6981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	4932947	5743981	796	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	5744656	5765715	32	-2.3842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	5765914	5777137	9	-0.4008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	5778558	6064366	232	0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	6064845	6079079	9	-0.9715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	6080464	18897446	9178	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	18905648	18917978	48	0.6217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	18918173	21803470	2610	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	21804082	21805256	4	-0.9428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	21805328	25040791	2238	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	25041485	25042313	3	-1.3459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	25043085	55119916	17005	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	55130608	55198894	48	0.4385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	55200787	101099594	28672	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	101103070	101103174	4	1.3854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	101103422	132743967	22518	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	132744128	132751620	5	0.7848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	132751751	134146340	1034	0.0424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	134146384	134147144	5	-0.7401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	134148062	134449982	224	0.0724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	20703	11111991	7275	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	11112094	11132799	11	-1.0626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	11143141	33185927	15601	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	33192673	33198641	27	-0.554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	33199627	36273993	844	0.047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	36298834	36300285	2	-1.9265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	36320625	125559813	56274	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	125560180	125569765	7	-1.1817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	125570030	132288262	5071	0.0484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	17924949	68140256	33071	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	68146300	68147482	7	-0.9098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	68148780	68157016	10	-0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	68157215	68166243	22	-0.854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	68167120	71374989	2064	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	71375556	71378557	4	-2.1259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	71378606	97308374	16967	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	97310167	97331831	10	-0.6874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	97336300	114126499	12180	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	18072124	18492533	29	-0.0875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	18502799	18730853	18	0.4791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	18759317	73490229	34506	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	73493530	73493535	2	1.6053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	73494809	105115415	20476	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	105125942	105238532	17	0.7022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	105265522	106356482	564	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	18276341	32501415	7818	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	32507087	32605609	69	-0.5689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	32617545	54578147	13695	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	54578172	54578467	7	-0.7885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	54578916	54579295	8	-0.1887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	54579316	54588269	6	-0.9019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	54588915	67116869	8508	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	67118339	67118414	2	1.7527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	67124729	95609413	18518	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	95618796	95633191	11	-0.6301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	95634653	100286563	3435	0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	777	31935479	20083	0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	31935807	32650790	119	0.2933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	32650982	32747898	13	-0.2516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	32751036	34316538	337	0.1525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	34317028	34618468	173	0.4907
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	34622594	54341931	6599	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	54342107	54379945	30	0.3423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	54387058	76929109	14516	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	76929941	76937176	13	-2.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	76940641	88815036	10649	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	526	36676616	20985	0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	36676629	36684057	19	1.2764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	36686250	53175939	9809	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	53179948	53180387	4	-1.4209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	53180469	78643088	14497	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	1543	38305676	24082	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	38310567	38311399	21	-0.5536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	38311432	49455889	7678	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	49458133	49464638	6	-0.786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	49466146	62057846	8753	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	62058414	62062569	10	-1.0746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	62062856	76116029	10281	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	41910	11024689	4290	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	11029662	11030052	2	-1.4578
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	11038408	20944898	5008	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	20944919	20945314	2	-1.3904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	20946008	40541162	7526	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	40541333	40553688	22	-0.4384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	40558584	58210326	9073	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	58210559	58246520	26	0.398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	58248636	63789666	3409	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	9305	1530092	1241	0.0227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	1530207	1541893	6	-1.0788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	1545946	62426597	41259	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	9758742	16555037	2050	-0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	16555651	16556495	5	-1.0541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	16556636	37129880	15116	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	37130304	37133883	3	-1.5274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	37134079	46921385	7241	0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	14432528	18853346	2152	0.0369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	18871884	18879111	2	1.4446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	18992706	47848940	20357	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	47849035	47849557	4	-0.9915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	47850525	49581321	1050	0.0651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	108477	6753770	3220	0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	6756228	6838521	62	-3.8686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	6840127	76270041	36840	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	76278683	76461534	18	1.0596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	76462887	115051983	20656	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	115052431	115064666	6	-1.7931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	115070447	121248397	3773	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	121248419	121248439	2	-2.4933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	121248840	154835548	19988	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	Y	2710438	57427647	8589	-0.9152
