Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	61735	25583291	14166	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	25583341	25646946	28	0.5037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	25646986	72768498	28866	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	72768916	72811148	46	-1.2497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	72811904	81888602	5790	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	81888605	81888667	2	-1.4654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	81888681	86773046	3392	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	86776822	86778266	2	-1.5591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	86780082	111377368	15401	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	111377565	111388226	38	-0.6783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	111392067	112690326	1078	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	112695965	112697198	21	0.4118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	112697213	152555527	8044	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	152555706	152586238	31	-0.717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	152586278	152759678	175	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	152761923	152768700	37	-1.2627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	152773905	167764835	10227	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	167766183	167766919	4	-1.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	167768513	196732086	19333	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	196738623	196815791	92	-0.4507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	196816730	210071062	8826	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	210081613	210093494	5	0.9971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	210093571	223020504	8958	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	223022923	223023769	3	-1.6448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	223026717	249224388	18177	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	12784	34652579	24104	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	34652871	34740757	63	0.4762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	34740799	41238235	4827	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	41238443	41245887	23	-0.5305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	41251233	52754468	8196	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	52754480	52781542	39	-0.5873
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	52787949	76842314	15563	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	76844466	76845426	6	-0.9414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	76847586	87128201	6444	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87129203	87137385	2	-1.6344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87161853	87445957	69	0.1133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87448720	87971885	133	0.4038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	87974463	106348112	7005	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	106348205	106351211	8	-0.8635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	106354138	146862085	24413	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	146864404	146866934	24	-1.6349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	146877806	159958620	7797	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	159960343	159960973	2	-1.9845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	159963287	184793232	15510	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	184793800	184802441	19	-0.4758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	184808589	195360610	5925	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	195365475	195366519	5	-1.0639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	195375509	203896897	4854	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	203899800	203902046	3	-2.5204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	203904140	213181322	5952	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	213186549	213192126	26	-0.8726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	213192158	215723306	1622	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	215729750	215730821	2	-1.9074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	215731190	227342038	7642	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	227342788	227346068	4	-2.5121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	227347799	243089456	9805	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	60345	65188453	45402	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	65189235	65210452	53	-0.5473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	65216349	68746259	2426	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	68746284	68747413	13	-1.1616
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	68748758	75568549	4938	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	75572549	75586805	5	-1.4851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	75595181	97909125	10413	-0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	97913425	97914817	2	-1.5872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	97915948	119350345	13281	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	119351398	119353938	5	-0.9983
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	119355411	162524858	26454	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	162528630	162540490	10	0.9156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	162545716	175080611	7714	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	175080747	175081226	4	-2.9939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	175081325	192874747	11530	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	192877902	192882903	20	-1.0756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	192886435	195285664	1486	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	195285898	195474182	46	-0.5036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	195474763	197896118	1174	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	12281	9451923	5248	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	9456977	9479345	10	1.2489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	9486087	10210390	546	-0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	10214160	10231498	29	-1.5874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	10234214	10390715	178	-0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	10392354	10400668	16	0.5183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	10402718	34786955	16815	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	34786990	34821340	34	0.6367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	34824183	64693940	16591	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	64697469	64707605	22	-0.8936
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	64707754	64708258	6	-2.9797
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	64716431	69284591	2864	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	69288138	69288142	3	-1.9327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	69294799	69374955	18	-0.0679
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	69375160	69485979	63	0.4426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	69489335	100293062	18739	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	100293197	100296452	3	-1.5663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	100299102	130062751	17774	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	130067546	130068160	2	-2.5744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	130072563	161873925	19307	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	161873940	161884908	23	-0.5641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	161884919	173422307	7327	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	173422322	173428643	11	0.6076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	173441132	191027923	11886	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	15532	667509	300	0.0648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	670745	800686	42	0.4275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	800839	12819313	9888	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	12819375	12838533	11	-1.2418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	12849201	57321646	25669	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	57326027	57333533	32	1.8327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	57338357	68846303	7306	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	68867294	69118135	5	1.5487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	69233427	106227527	20982	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	106229673	106233100	19	-0.7422
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	106233117	151514171	29383	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	151515386	151518351	14	-1.8776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	151520271	180374523	19322	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180378710	180433264	21	0.5259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180442400	180518765	58	0.0774
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180520810	180532990	5	-0.6932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	180533008	180790320	106	0.0505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	149661	254283	101	0.031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	257353	291082	18	0.6177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	294286	26732391	20164	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	26732406	26762572	19	0.4472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	26762638	29837188	1447	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	29837314	29850196	15	-1.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	29850274	32454523	1193	0.0565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	32456683	32602107	51	-0.528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	32602269	53931419	13767	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	53931803	53931855	2	-1.6551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	53935348	65710729	4598	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	65711399	65713792	3	-2.4199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	65717384	66394090	457	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	66399482	66407127	25	-0.6709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	66407210	74592225	5444	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	74592457	74597341	8	-2.5672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	74601410	77421382	1760	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	77421492	77469096	38	0.3042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	77470251	78971712	976	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	78971781	79041633	110	-0.5235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	79041719	81284716	1433	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	81284759	81289534	28	-0.9039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	81294341	161032565	51066	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	161032719	161033283	5	0.989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	161068042	171051005	7270	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	43355	26132290	18873	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	26142392	26145413	4	-3.1715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	26147219	54380373	19700	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	54386505	54386517	6	1.321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	54393488	142474939	49332	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	142476719	142486045	27	-1.9721
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	142486115	143909445	842	-0.0258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	143911624	144103117	46	0.3731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	144103915	146222177	1313	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	146222283	146222865	2	1.3441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	146226431	152827520	3991	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	152829906	152830642	2	-1.6621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	152831150	153147638	265	0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	153147645	153147712	2	-2.3107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	153147715	153399165	217	0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	153399388	153399420	2	-1.3684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	153400815	159127004	3898	0.0171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	31254	7186632	7834	0.0273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7186646	7238019	26	-0.5319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7250380	7943182	177	0.2659
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7943408	7962459	7	-1.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	7962597	12240162	3285	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	12240182	12419965	82	0.2947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	12420090	16259612	3543	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	16262235	16282587	30	-0.7113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	16283341	24976641	6877	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	24976675	24979972	11	-0.5386
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	24979987	33764921	6059	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	33765126	33765747	2	-2.1541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	33769792	143465679	67095	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	143465880	143473926	3	-1.5177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	143482961	146298155	964	0.0345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	46587	602903	513	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	606699	606961	4	-1.8046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	607307	24503816	20756	0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	24504125	24517682	19	-2.7523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	24519684	41733631	10073	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	41842529	41978375	8	-0.96
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	41985187	43187967	25	0.053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	43315670	43800186	41	0.5494
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	44114872	45407615	120	-0.0332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	45448614	45749018	17	-0.4977
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	45749108	90522594	14580	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	90554151	90554219	2	-2.0434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	90557957	98250087	5059	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	98250198	98250559	4	0.9833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	98250958	113024442	10676	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	113024789	113028169	2	-3.0543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	113032431	141091394	18063	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	72759	4290814	3588	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	4290838	4290924	2	2.1583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	4291016	6411215	1834	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	6411357	6411481	5	0.9248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	6418754	18173963	9474	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	18185123	18199813	3	-2.3354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	18223647	20853201	2141	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	20853272	20853503	2	-1.5683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	20853534	24372305	2197	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	24372757	24378054	13	0.7796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	24378908	46691480	12335	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46917315	46943377	5	-1.3228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46946708	46995420	47	0.092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	46995474	47100656	83	0.3973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	47102723	67306276	13030	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	67307923	67314430	27	0.5352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	67314446	135506704	46332	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	198510	4967650	2478	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	4968117	4976334	32	0.6981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	4976371	5787405	796	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	5788080	5809139	32	-2.3842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	5809338	5820561	9	-0.4008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	5821982	6107790	232	0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	6108269	6122503	9	-0.9715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	6123888	18940870	9178	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	18949072	18961402	48	0.6217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	18961597	21846894	2609	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	21847506	21848680	4	-0.9428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	21848752	25084215	2238	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	25084909	25085737	3	-1.3459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	25086509	55363340	17003	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	55374032	55442318	48	0.4385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	55444211	101594384	28669	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	101597860	101597964	4	1.3854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	101598212	133238757	22514	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	133238918	133246410	5	0.7848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	133246541	134641130	1034	0.0424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	134641174	134641934	5	-0.7401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	134642852	134944770	224	0.0724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	150442	11220724	7274	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	11220827	11241532	11	-1.0626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	11251874	33294660	15598	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	33301406	33307374	27	-0.554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	33308360	37987726	844	0.047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	38012567	38014018	2	-1.9265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	38034358	126993860	56271	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	126994227	127003812	7	-1.1817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	127004077	133778189	5070	0.0484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	19026949	69242255	33068	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	69248299	69249481	7	-0.9098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	69250779	69259015	10	-0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	69259214	69268242	22	-0.854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	69269119	72476988	2064	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	72477555	72480556	4	-2.1259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	72480605	98510373	16966	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	98512166	98533830	10	-0.6874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	98538299	115108397	12180	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	19002124	19422533	29	-0.0875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	19432799	19660853	18	0.4791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	19689317	74420476	34502	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	74423777	74423782	2	1.6053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	74425056	106044370	20477	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	106054897	106167487	17	0.7022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	106194477	107285437	564	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	20016328	34714123	7819	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	34719795	34818317	69	-0.5689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	34830253	56790855	13694	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	56790880	56791175	7	-0.7885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	56791624	56792003	8	-0.1887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	56792024	56800977	6	-0.9019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	56801623	69329815	8506	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	69331285	69331360	2	1.7527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	69337675	97808409	18518	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	97817792	97832187	11	-0.6301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	97833649	102469040	3434	0.0217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	60777	32027978	20081	0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	32028306	32743289	119	0.2933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	32743481	32840397	13	-0.2516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	32843535	34459037	337	0.1525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	34459527	34760967	173	0.4907
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	34765093	55784430	6599	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	55784606	55822444	30	0.3423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	55829557	78371608	14434	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	78372440	78379675	13	-2.0595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	78383140	90287535	10652	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	526	39423090	20984	0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	39423103	39430531	19	1.2764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	39432724	55820940	9811	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	55824949	55825388	4	-1.4209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	55825470	81049726	14496	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	11543	40051678	24081	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	40056569	40057401	21	-0.5536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	40057434	51201891	7677	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	51204135	51210640	6	-0.786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	51212148	63906866	8752	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	63907434	63911589	10	-1.0746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	63911876	78015057	10281	0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	90910	11163689	4290	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	11168662	11169052	2	-1.4578
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	11177408	21153058	5007	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	21153079	21153474	2	-1.3904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	21154168	35849322	7526	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	35849493	35861848	22	-0.4384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	35866744	53518514	9073	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	53518747	53554708	26	0.398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	53556824	59097854	3409	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	61305	1582092	1241	0.0227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	1582207	1593893	6	-1.0788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	1597946	62956153	41262	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	10736871	17633166	2050	-0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	17633780	17634624	5	-1.0541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	17634765	38208010	15117	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	38208434	38212013	3	-1.5274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	38212209	48096957	7239	0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	16052528	20473346	2152	0.0369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	20491884	20499111	2	1.4446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	20662706	49462936	20356	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	49463031	49463553	4	-0.9915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	49464521	51234455	1051	0.0646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	168477	6743770	3220	0.0264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	6746228	6828521	62	-3.8686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	6830127	76353650	36850	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	76362292	76545159	18	1.0596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	76546512	115137955	20631	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	115138403	115150638	6	-1.7931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	115156419	121420716	3771	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	121420738	121420758	2	-2.4933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	121421159	155182354	19992	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	Y	2650438	59018259	8634	-0.9154
