Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	1	3208470	245880329	129073	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	2	474222	242124735	131272	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	3	526235	199023074	106369	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	4	1043934	189836143	102718	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	5	967233	180293075	100490	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	6	959281	170745844	96463	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	7	671810	158077879	81298	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	607667	63450713	33814	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	63450716	63454764	2	-1.536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	63455472	134052585	41356	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	134053651	134053974	2	-1.3577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	8	134054201	145304484	6344	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	9	779932	140058573	68012	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	10	405240	135075077	80855	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	11	446120	133647740	77252	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	12	760163	131671419	73945	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	13	18348806	114005560	56640	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	19571208	69648709	27749	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	69649883	69656720	3	1.1367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	69657342	73490229	2335	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	73493530	73493535	2	1.6053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	14	73494809	105059083	19353	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	15	21238778	99701830	44524	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	593460	5769552	2113	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	5770106	5772329	2	-1.5009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	16	5772947	87907437	38746	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	933971	53175939	24339	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	53179948	53180387	4	-1.4209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	17	53180469	78510305	12643	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	319586	66110471	38313	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	66111294	66112844	5	-0.8784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	18	66114751	75210228	4336	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	235018	11024689	3728	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	11029662	11030052	2	-1.4578
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	19	11038408	63570038	20215	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	20	403764	61690281	37278	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	21	14269492	46503202	20581	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	22	15803930	47717016	16922	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	3167107	121248397	48654	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	121248419	121248439	2	-2.4933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_D12_896534	X	121248840	154558783	15068	0.0061
