Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	51598	72541006	42976	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	72541086	72583736	47	1.4419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	72584492	81661044	5787	-0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	81661190	81661193	2	2.2315
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	81661255	105814899	15254	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	105820728	105823867	15	0.5963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	105823883	111177743	3530	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	111178891	111189749	39	-0.7945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	111193590	120886421	6224	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	120886544	120894018	5	0.9588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	120895123	146395960	1204	-0.0193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	146780414	147056085	35	-0.4448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	147056472	150822330	1680	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	150822391	150852902	31	1.6887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	150853164	167483561	11551	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	167500598	167508390	7	-2.4114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	167509025	195007939	18221	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	195007990	195015840	12	-0.7734
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	195016444	246005034	35387	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	246005371	246005480	2	1.8973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	246005621	246804070	467	-0.0439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	246815817	246875180	34	-0.6363
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	246875487	247191011	143	0.0506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	2784	34506375	24101	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	34513440	34594303	63	0.4151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	34594531	35829477	872	-0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	35831294	35841451	7	-1.5126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	35850977	52592721	12162	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	52595241	52635046	42	0.4487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	52641453	86981712	22013	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	86982714	86990896	2	-2.1278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	87015364	89374870	870	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	89377409	91153439	208	-0.7073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	91153802	127558707	19012	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	127558794	127574416	12	0.7032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	127575116	129354948	1028	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	129354972	129356767	13	-0.5669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	129356785	134772954	3155	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	134773145	134773340	2	2.0805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	134774727	134780870	13	-0.0701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	134782946	134784477	4	1.1752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	134784940	138241975	2174	0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	138242457	138242472	2	1.4116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	138248503	140077855	1120	-0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	140082561	140089804	2	-1.3476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	140095018	146578555	4012	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	146580874	146583404	24	0.6525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	146594276	164345098	10600	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	164351734	164353372	5	-1.1299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	164354888	185024921	13112	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	185025125	185026291	2	1.5444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	185026796	212889560	16338	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	212889567	212900423	29	-0.8409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	212900462	229467723	10824	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	229467890	229473627	14	0.513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	229474267	241101629	7514	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	241101981	241102868	10	-0.8482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	241104906	242738129	705	0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	35345	26588205	20083	-0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	26589978	26589986	6	-1.0727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	26589988	53007078	15721	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	53008188	53009220	6	0.9465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	53009266	68828854	12054	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	68828949	68830103	14	-1.0641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	68831448	100417202	15957	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	100417294	100431492	27	-0.4282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	100431602	133472020	20264	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	133472037	133478374	5	-1.4062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	133483167	137501789	2589	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	137505641	137508116	2	-2.9465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	137521231	147116096	5858	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	147124612	147125055	3	-1.2342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	147125103	164197211	10532	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	164200421	164202256	2	-2.396
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	164208853	194357441	19123	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	194360596	194361700	7	0.9384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	194363167	196766953	1499	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	196767187	196960434	48	0.479
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	196964365	199380515	1173	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	2281	24630	20	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	25359	64983	48	-0.3979
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	65023	3569248	1443	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	3569667	3571982	2	-2.2026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	3579188	4990457	806	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	4990895	4993723	4	-1.8239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	4994035	9066075	2927	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	9070328	9088443	9	-0.8808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	9095185	9819488	545	0.0228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	9823258	9843364	31	0.4334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	9843706	34455255	16996	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	34455357	34506267	45	-0.3242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	34506308	64373473	16585	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	64374002	64390853	33	0.3582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	64399026	68967186	2862	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	68970733	68970737	3	-1.7691
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	68977394	69021057	7	0.1187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	69021159	69204004	74	0.518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	69211554	104965020	21422	-0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	104971079	104971086	5	1.0914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	104971093	115393149	6311	-0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	115394772	115403759	27	0.5686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	115403771	130282201	8731	-0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	130286996	130287610	2	-2.7978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	130292013	138311689	4523	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	138311870	138312357	9	-0.8763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	138312376	162093362	14772	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	162093375	162104358	24	-0.6961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	162104369	172605921	6677	-0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	172611459	172611524	2	-1.7017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	172611602	172614019	6	-0.4819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	172614033	173224503	401	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	173225723	173238406	17	0.6695
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	173238621	189458252	10939	-0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	189458354	189458433	4	1.7737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	189459807	191261904	1177	-0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	68532	738748	308	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	751371	832860	30	0.4369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	832881	57357403	35569	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	57361784	57369290	32	1.6844
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	57374114	62594127	3430	-0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	62595470	62595993	2	-1.3103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	62596818	75485776	7030	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	75485823	75485900	3	1.3207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	75485932	104461321	16857	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	104461493	104526294	44	-3.6994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	104530866	151494364	30314	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	151495579	151498544	14	-1.6898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	151500464	180722926	19512	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	94661	202353	102	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	203265	239837	22	-0.6029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	247306	8867189	7094	-0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	8870345	8879991	14	-1.0917
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	8880228	32717405	15774	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	32732282	32734596	6	-1.1149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	32758590	32798005	45	0.0678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	32798775	32798790	2	2.7345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	32798808	41726739	5886	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	41727028	41727225	2	-1.369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	41727667	54039026	7813	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	54039043	54043374	10	0.7285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	54043657	65393663	4354	-0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	65404265	65405713	2	-1.8875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	65407497	67068322	1110	-0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	67081055	67100610	41	0.2823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	67100644	69710480	1842	-0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	69713776	69717962	2	1.4722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	69719088	77071668	4650	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77073620	77073646	3	1.8223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77073713	77084501	31	-0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77089673	77089929	3	1.1672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77090104	77145707	40	0.0667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77149329	77153548	3	-1.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77162166	77493251	219	-0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77496587	77524650	23	-0.6711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	77525185	78383755	581	-0.0475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	78386571	78389612	3	-0.8522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	78391578	78409485	13	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	78412319	78412826	5	-1.4038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	78412958	79028521	381	-0.0231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	79028553	79084489	100	0.376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	79089036	103841522	15493	-0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	103844669	103854114	10	0.622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	103854125	103858031	9	1.2063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	103858257	103866418	21	0.4777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	103866518	160951708	36978	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	160951755	160953273	13	-0.586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	160988032	170892930	7267	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	52911	19186833	13625	-0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	19186846	19188696	13	0.5901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	19190855	19540288	300	-0.027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	19540309	19556355	11	-0.5673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	19560551	22401305	2156	-0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	22401997	22403012	2	-2.4314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	22405279	26098815	2767	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	26108917	26111938	4	-1.1609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	26113744	53284323	18944	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	53285881	53286279	2	-2.3285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	53289177	54353999	755	-0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	54354003	54354011	5	-2.446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	54360982	70058374	6294	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	70061186	70064077	2	-1.963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	70066179	84050758	7685	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	84055971	84064992	7	-1.0793
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	84065410	91195805	4409	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	91196230	91196476	3	1.4029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	91196707	109224328	10403	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	109224329	109224913	11	0.69
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	109224916	125833779	10070	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	125833836	125833851	2	1.6093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	125834112	142154229	10431	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	142154515	142165684	29	0.3907
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	142165914	158819765	10579	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	21254	584944	328	-0.0286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	584973	585875	7	0.8435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	585892	585908	2	3.8585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	591043	2689341	1784	-0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	2690940	2691306	7	-1.438
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	2694578	5586134	3969	-0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	5586143	5591708	24	-0.6002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	5591735	12276787	5199	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	12278011	12291857	36	-0.6676
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	12305298	16306606	3597	-0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	16306618	16323066	28	-0.5155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	16326958	23458253	5724	-0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	23463685	23463816	5	-1.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	23463850	25030494	1144	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	25031417	25032558	5	-0.6269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	25032592	25035823	7	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	25035846	25040250	11	-0.5066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	25047021	51194564	13692	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	51194577	51194940	7	-1.7871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	51201131	112364214	37467	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	112364257	112364436	4	-2.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	112369457	146268959	22934	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	36587	67673801	31660	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	67675871	67675877	4	2.1055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	67675879	140211215	48262	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	62759	24417680	19247	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	24417681	24417688	6	-1.864
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	24417924	56850159	18418	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	56850247	56850323	3	-1.5171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	56850327	57257935	314	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	57258298	57260774	2	1.709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	57263103	61034121	2722	-0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	61034136	61035811	11	0.6243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	61036270	66976282	4023	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	66977929	66984407	26	-0.4725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	66984436	135356694	46333	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	188510	3443300	1349	0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	3444241	3445117	3	-1.4356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	3463102	4926943	1135	0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	4928581	4932281	21	-1.5141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	4932833	4933658	16	-0.401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	4934958	5743981	783	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	5744656	5764902	28	-0.4412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	5764916	6064366	244	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	6064845	6073419	4	-1.4557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	6073590	50952948	30699	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	50983318	51040482	9	-1.3879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	51049446	54476600	140	-0.0321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	54477399	54514867	2	1.5359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	54530469	85983309	18105	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	85983461	85983702	5	-1.3569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	85992822	91470137	3570	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	91470306	91470691	2	2.8618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	91472352	96638298	3772	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	96638322	96738328	68	-0.8749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	96740865	133322682	26375	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	133322866	133323307	2	1.6507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	133324652	134449982	840	0.0615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	12	20703	226103	115	0.099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	12	226700	227572	2	2.0708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	12	227580	11111991	7159	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	12	11112094	11132799	11	-1.0413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	12	11143141	132288262	77810	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	17924949	23528915	3682	-0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	23530140	23530677	3	-1.5551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	23531050	36969135	9885	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	36970036	36986387	19	0.539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	36986609	50443055	9124	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	50444912	50447199	2	2.3513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	50447558	56676381	3448	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	56687715	56694631	6	-1.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	56699202	56739785	32	-0.0481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	56740026	56745874	7	-1.0298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	56749814	114126499	38116	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	18072124	18670435	42	-0.0728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	18672674	19493212	148	0.4173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	19494766	21463361	1355	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	21463385	21474475	25	-0.394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	21474514	36405339	9643	-0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	36405621	36406386	4	1.1965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	36406723	39678679	1895	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	39683673	39686670	2	-2.3076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	39687916	40680246	722	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	40680440	40723727	12	-0.8156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	40726999	41924915	764	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	41925216	41925467	3	-1.3161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	41926726	105345310	40456	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105346378	105499435	55	0.3343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105501013	105649292	62	-0.0476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105651591	105848018	95	0.5029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105848388	105892781	13	-0.5508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105896961	105939331	26	-0.0488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105939599	105983675	45	0.3243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	105985239	106356482	233	-0.0346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	18276341	18507169	52	-0.042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	18522250	20232614	370	-0.6892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	20302458	80865645	37624	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	80880206	80905894	4	-1.6459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	80966604	100286563	14022	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	16	777	19851864	13531	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	16	19853151	19870624	24	-0.5978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	16	19872839	54354095	13778	-0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	16	54355723	54356280	3	2.7623
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	16	54361849	88815036	25183	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	526	611794	337	0.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	613993	614127	2	1.7851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	625241	849072	128	-0.0356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	850569	883238	10	0.6874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	883601	31460821	17920	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	31461241	31509204	37	0.8963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	31552238	41719947	5208	0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	41750187	42107462	47	-0.4365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	42107479	76243458	20651	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	76244388	76248774	2	2.0499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	76248895	78643088	963	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	18	1543	76116029	50823	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	19	41910	40541061	16823	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	19	40541149	40558641	27	-0.4952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	19	40558794	63789666	12505	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	9305	1530207	1242	0.0213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	1538257	1541893	5	-1.6097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	1545946	53061637	34653	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	53061781	53064870	2	1.8003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	53064986	62426597	6600	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	21	9758742	46921385	24412	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	14432528	22660218	4617	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	22660269	22661967	2	-2.5805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	22662625	22674422	5	-0.095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	22680529	22726814	19	0.746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	22731529	39123206	11591	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	39124536	39127618	3	-1.4326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	39130017	41227226	1198	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	41229384	41309995	36	0.3905
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	41311111	49581321	6094	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	X	108477	154835548	84621	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	2710438	3045595	151	-2.6609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	3065268	6177910	693	-2.3528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	6180432	6356423	80	-3.6987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	6359046	14099670	2613	-2.8171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	14099736	14103917	3	-7.6439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	14104283	18084284	2079	-2.8429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	18085938	19430134	648	-3.3845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	19430886	19431561	2	-8.1584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	19431797	19547873	54	-3.3811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	19551832	22919906	1241	-2.8735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	22924247	25684358	495	-3.4366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	25707759	26129939	95	-2.6355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	26130472	26833326	251	-3.5214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	Y	26847504	57427647	183	-2.5335
