Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	1	3218610	247813706	129103	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	2	484222	242476062	131239	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	3	2212571	197538677	106352	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	1053934	4939556	1689	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	4939994	4942822	4	-1.8239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	4	4943134	188763651	101012	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	5	914233	180360469	100475	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	6	1014281	170903919	96452	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	705284	53316829	31321	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	53318387	53318785	2	-2.3285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	7	53321683	158385118	49963	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	8	617667	145232496	81523	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	789932	3880973	2078	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	3881005	3881013	2	-1.3191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	3881132	25691032	13702	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	25695174	25696292	4	-1.1575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	9	25702960	140938752	52222	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	10	415240	135225087	80840	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	456120	97133088	52689	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	97133112	97233118	68	-0.8742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	11	97235655	134142530	24475	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	12	889902	133161346	73922	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	13	19450806	114987458	56627	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	14	20501368	105988038	49430	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	23687685	98377630	42621	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	98377644	98380117	3	-1.1298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	15	98381762	101884307	1892	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	16	653459	89379936	40787	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	17	987221	80917016	36978	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	18	329586	77109240	42645	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	19	284018	58878226	23943	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	455764	30165127	16988	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	30167681	30168740	3	-1.3696
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	20	30169252	62219837	20286	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	21	15347621	47678774	20578	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	22	17423930	49331012	16921	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	X	3157107	88974207	34715	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	X	88976824	88981409	2	-1.629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E01_896538	X	88983271	154905589	29066	0.0023
