Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	3218610	83348970	45466	0.0586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	83349640	83420941	50	0.5365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	83431709	92780024	5899	0.0751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	92784221	92785038	2	-1.7235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	92786742	187606051	39669	0.0626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	187607131	200740975	7585	-0.2903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	200747867	226134471	16431	0.0575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	226136590	226136723	2	-2.3553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	226137119	241513635	10556	0.0484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	241513836	241518598	2	-1.6887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	1	241518916	247813706	3271	0.0543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	2	484222	160770579	84241	0.0842
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	2	160771575	160859235	71	0.5138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	2	160860151	242476062	46812	0.0833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	2212571	19595902	10379	0.0633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	19599696	49102413	16936	-0.2862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	49112678	49561430	144	0.2152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	49563585	65580758	9465	-0.2928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	65585538	65656677	56	0.357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	65658302	84978010	11269	-0.2991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	3	84985643	197538677	57946	0.0629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	4	1053934	85855624	46807	0.2608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	4	85856120	85946286	44	0.6641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	4	85950122	147015296	33492	0.319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	4	147018688	148725508	1007	0.7031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	4	148729270	188763651	21318	0.3196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	914233	1308552	60	0.7913
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	1309074	1428514	62	-0.2515
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	1890233	3361165	1255	0.3115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	3361181	3988440	507	-0.3221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	3991136	4106399	101	0.3495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	4106438	5782068	1341	-0.2812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	5782545	5786036	4	-1.7375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	5786107	17011770	7162	-0.2833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	17025053	17395269	203	0.311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	17395944	17416655	13	-0.2595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	17418330	17458474	34	0.3121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	17756201	19534828	988	-0.256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	19537086	20795896	529	0.3339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	20803221	20898411	16	-0.1651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	20903193	23819475	1558	0.6995
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	23821658	25563200	827	0.3316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	25564120	25582535	9	-0.208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	25582936	25598148	9	0.458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	25599421	25912113	198	-0.2462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	25920401	27325775	800	0.3129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	27327337	27717180	176	-0.2715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	27717944	28424575	381	0.3192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	28426649	29345591	475	-0.2801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	29346038	29376836	18	0.3646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	29378826	30047928	402	0.7192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	30050769	30285601	133	0.3091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	30292013	31334486	718	0.6869
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	31336518	31520234	187	-0.2466
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	31520694	45378456	7712	0.3288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	50124856	172933842	70483	-0.2871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	172934387	172994543	58	0.2195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	5	172994744	180360469	3815	-0.2999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	1014281	52875944	31244	0.6757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	52880756	52881235	2	-0.7954
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	52881818	55944401	1978	0.7165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	55945010	80110296	10464	0.3267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	80181356	90798204	6009	-0.297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	90799007	90799485	2	-2.2442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	90799673	114638527	13599	-0.2988
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	114638533	114640558	2	-2.4069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	114643229	128623968	7483	-0.2961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	128624360	128624569	2	-2.5658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	128624615	167043245	24372	-0.2964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	167044079	167047627	2	-2.4729
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	6	167047946	170903919	1163	-0.2927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	705284	118542848	60168	0.3144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	118544061	118996494	213	0.8525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	118997002	125945936	3776	0.3169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	125946226	125946390	2	-1.1282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	125946487	129537213	1771	0.296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	129538294	129686608	75	0.7651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	7	129694738	158385118	15261	0.3004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	8	617667	1822439	559	0.0807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	8	1822900	1823659	2	-1.7154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	8	1824149	145232496	80888	0.0623
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	789932	123051783	58321	-0.2735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	123060322	123195136	116	0.3019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	123196477	133754220	5967	-0.2836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	133754592	133949698	130	0.093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	133955276	135288261	828	-0.2989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	135288778	135445096	105	0.0456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	9	135462633	140938752	2298	-0.2823
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	415240	1408581	302	0.0606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	1409973	1414085	2	-2.0523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	1414544	1560338	112	0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	1560743	1560898	2	-2.8371
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	1561211	28843646	19169	0.0467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	28849760	29411140	437	0.4945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	29412004	98145196	37282	0.0299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	98148557	102034370	2388	0.4374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	10	102040077	135225087	21046	0.0232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	456120	20284258	12524	-0.2722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	20284420	20285599	2	-3.7239
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	20285788	45625067	16206	-0.2794
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	45625143	45630682	2	-3.0421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	45636270	47393638	764	-0.2819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	47394305	47394317	2	-2.077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	47396222	60700583	3568	-0.2816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	60703076	60810757	68	0.2751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	11	60811112	134142530	43817	-0.2737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	889902	19888651	10762	-0.2891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	19888725	33519450	8746	0.46
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	33519525	81493826	24547	0.1682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	81493930	81494274	3	-0.7832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	81496075	84909752	2016	0.3137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	84911072	84918749	3	-0.7819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	84919096	84946834	15	0.2234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	84947190	84977642	23	0.8348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	84980011	112587945	16721	0.0799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	112594579	112650127	27	0.4177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	12	112656882	133161346	10985	0.1284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	13	19450806	50206878	19416	-0.2822
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	13	50223520	50371426	59	0.3605
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	13	50377041	88526804	20094	-0.2761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	13	88526989	88615704	49	0.2944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	13	88617619	114987458	16815	-0.2938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	20501368	26309051	2637	-0.2785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	26310229	26312769	2	-2.4151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	26317302	41585647	8721	-0.2677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	41585708	41727450	55	0.0625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	41730948	50124676	3650	-0.2689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	50127761	50638529	257	0.2665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	14	50643257	105988038	33951	-0.2843
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	23687685	39159021	7420	-0.2714
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	39159075	39159221	2	-2.3319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	39159349	52528303	7332	-0.2845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	52528410	53612177	783	0.0661
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	53612495	54999195	1043	-0.2655
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	55000914	59911892	2993	0.0614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	59912828	61040263	805	-0.2722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	15	61042751	101884307	24058	0.1407
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	16	653459	89379936	40738	0.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	17	987221	8376977	3465	-0.2968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	17	8378458	8390506	10	-1.0369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	17	8392153	35550949	10718	-0.2807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	17	35555236	80917016	22723	0.4175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	18	329586	68794416	38676	-0.2702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	18	68799046	68873360	51	0.0786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	18	68873558	77109240	3777	-0.2838
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	19	284018	58878226	23812	-0.286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	455764	1342533	447	-0.2658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	1343066	1489424	113	0.062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	1489630	29843973	16205	-0.2633
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	29846281	50398001	12425	0.5945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	50401161	50469479	43	0.9975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	50486629	54813162	3091	0.629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	20	54813533	62219837	4875	0.0455
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	15347621	15552993	89	0.0775
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	15568183	15745390	131	-0.8612
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	15748186	15814139	39	0.0474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	15816204	20737862	3097	-0.7801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	20741914	29812117	5737	0.0628
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	29812347	30163997	269	-0.2847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	30164425	36190823	3791	0.0576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	36197940	36268090	46	0.4427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	21	36269508	47678774	7321	0.0504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	22	17423930	49331012	16912	0.3525
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	X	3157107	63791143	24332	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	X	63797243	63797359	2	-2.3851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E04_896472	X	63797769	154905589	39292	0.0028
