Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	3208470	102196697	57386	0.0241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	102197619	102725673	200	0.3244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	102730728	187515627	34573	0.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	187516191	187900445	69	-0.3841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	187904642	188226001	231	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	188226122	188226540	3	-0.9177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	188226803	239101096	32968	0.0327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	239106145	240071967	721	-1.0923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	240075450	240356082	131	0.0309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	240359417	240362270	3	-1.2334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	240365847	243500884	1773	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	243503405	243558029	42	-0.409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	243560088	245880329	960	0.0294
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	2	474222	239959906	130037	0.3097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	2	239962639	240113104	92	-0.0316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	2	240116711	242124735	1140	0.2432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	526235	36279175	20306	0.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36279269	36302493	33	-0.9571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36309859	36597318	170	0.0557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36666405	36711927	30	0.6158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36712182	184037605	78182	0.0503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	184040530	184045457	5	-0.7292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	184046462	199023074	7646	0.0429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	1043934	47763583	28149	0.0412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52393514	52409268	11	1.0852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52409487	52451358	29	1.5193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52452932	52479994	17	0.89
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52489501	52607346	66	-0.4093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52615246	52632738	16	0.0505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52634266	52646251	7	-0.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52647647	52722959	42	0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52723011	52806559	47	-0.3678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52806789	52845540	27	0.7224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52848087	53165844	165	-0.3863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53171863	53328518	72	0.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53336881	53735644	254	-0.3549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53745970	53898458	62	0.0642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53902538	53951888	35	0.8708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53952852	54075829	67	0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54076102	54086236	11	-0.5373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54088850	54185983	101	0.0624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54187138	54726252	349	-0.3546
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54726396	54851620	151	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54851891	54922420	67	0.5597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54925966	54942959	19	-0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54943360	55384252	464	-0.3678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55384285	55431387	36	-0.046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55431463	55445828	12	-0.3349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55446702	55457082	9	0.9963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55462250	61043314	3277	-0.3719
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	61044678	61045977	2	1.0737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	61048189	66926155	3052	-0.3722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	66929715	75307377	3710	-1.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	75307392	75308734	17	-0.4001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	75308776	75327872	33	-0.821
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	75328004	189836143	62299	-0.3602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	967233	23764989	13825	0.7796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	23765232	23770283	4	-0.1589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	23772840	45414213	12107	0.7989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	50160613	107540044	30516	-0.3752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	107540665	107540682	2	-2.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	107543600	171126843	39201	-0.3827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	171127175	171127732	3	-1.7484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	171129127	180293075	4800	-0.4347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	6	959281	10037834	6458	-0.3996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	6	10040446	10042157	3	-2.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	6	10048050	170745844	89970	-0.3765
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	671810	19878347	9278	1.2107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	19878565	51559078	20735	0.9452
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	51563084	51566203	2	-0.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	51572539	57242577	3350	0.918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	57247983	77924363	5934	0.5181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	77928293	78000089	44	1.3522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	78008524	99477381	11279	0.5908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	99478159	99478927	2	-0.6278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	99480552	120065781	10384	0.5764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	120069969	120455709	183	1.0757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	120458270	134452629	7864	0.5806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	134458186	134465531	7	0.0808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	134471255	158077879	12227	0.5524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	607667	15067447	7002	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	15069647	15091357	26	0.3131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	15091385	69511295	30056	0.0237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	69511312	69633982	67	0.3266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	69634003	71022178	905	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	71024153	71031517	4	-1.5634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	71033410	145304484	43453	0.0395
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	779932	19931897	12046	-0.3877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	19935420	20691184	557	-2.9723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	20691305	22108102	979	-2.4369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	22108749	22109128	3	-1.3303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	22111633	140058573	54383	-0.3889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	405240	76777030	43998	0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	76780901	76806079	20	0.5441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	76807131	106910090	18400	0.0347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	106912615	107196248	149	-0.9592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	107198028	111539386	2815	0.0418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	111540262	135075077	15379	-1.0651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	446120	27142518	17213	0.0232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	27143936	27149121	5	-0.767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	27150675	48960138	12863	0.0161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	48960517	48978155	3	-1.0385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	48980153	84261371	15031	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	84261681	84261969	2	-1.2427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	84262603	117331062	20877	0.0329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	117331238	117343150	5	-1.0323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	117345362	133647740	11244	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	760163	38610409	20125	0.3367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	38610560	38618120	23	-0.2889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	38619876	131671419	53787	0.332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	18348806	85859838	38925	-0.3899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	85860890	100602565	9072	0.3461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	100605965	100761139	124	1.094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	100772164	101124048	297	0.3375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	101131915	101132036	2	-1.5248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	101133509	114005560	8198	0.3283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	19571208	39123382	10669	-0.3885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	39130267	39246577	67	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	39246594	98733600	35780	-0.3943
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	98734737	98736153	3	-1.8982
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	98737440	105059083	2882	-0.4457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	15	21238778	47439816	13165	0.1673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	15	47440468	47471374	11	0.6238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	15	47482875	99701830	31346	0.0397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	593460	6572889	2728	0.682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	7072184	8136935	620	0.2819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	8138663	8143680	6	-0.4536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	8144724	31757800	10532	0.296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	45065166	73981655	17399	-0.4053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	73983798	73984526	5	-1.8086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	73985697	87907437	9560	-0.4264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	933971	20474788	9348	-0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	20474847	20480818	2	-2.0572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	20488230	46994298	10801	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	46995183	47081761	73	0.3356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	47083999	78510305	16756	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	319586	22824356	11733	-0.4035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	22824665	22825878	2	-2.0736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	22830250	36844021	8518	-0.3807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	36853335	36865225	7	-2.0762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	36866452	75210228	22377	-0.3944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	19	235018	63570038	23946	-0.0584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	20	403764	56202318	33843	0.305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	20	56202490	56202771	2	-0.805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	20	56204575	61690281	3434	0.2709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	21	14269492	34404304	12816	0.5727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	21	34404506	34404649	6	-0.0764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	21	34404864	46503202	7760	0.5245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	22	15803930	32097197	7139	-0.0244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	22	32097245	47717016	9783	0.8505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	X	3167107	71204736	27419	-0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	X	71208052	71209984	2	-1.7779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	X	71211366	154558783	36321	-0.0051
