Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	3218610	102424109	57447	0.0237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	102425031	102953085	200	0.3244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	102958140	189249004	34569	0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	189249568	189633822	69	-0.3841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	189638019	189959378	231	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	189959499	189959917	3	-0.9177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	189960180	241034473	32967	0.0327
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	241039522	242005344	721	-1.0923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	242008827	242289459	131	0.0309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	242292794	242295647	3	-1.2334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	242299224	245434261	1772	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	245436782	245491406	42	-0.409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	1	245493465	247813706	960	0.0294
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	2	484222	240294969	130029	0.3097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	2	240297702	240448167	92	-0.0316
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	2	240451774	242476062	1140	0.2432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	2212571	36304171	20305	0.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36304265	36327489	33	-0.9571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36334855	36622314	170	0.0557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36691401	36736923	30	0.6158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	36737178	182554911	78177	0.0503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	182557836	182562763	5	-0.7292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	3	182563768	197538677	7646	0.0429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	1053934	48068826	28149	0.0412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52698757	52714511	11	1.0852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52714730	52756601	29	1.5193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52758175	52785237	17	0.89
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52794744	52912589	66	-0.4093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52920489	52937981	16	0.0505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52939509	52951494	7	-0.3493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	52952890	53028202	42	0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53028254	53111802	47	-0.3678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53112032	53150783	27	0.7224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53153330	53471087	165	-0.3863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53477106	53633761	72	0.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	53642124	54040887	254	-0.3549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54051213	54203701	62	0.0642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54207781	54257131	35	0.8708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54258095	54381072	67	0.0359
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54381345	54391479	11	-0.5373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54394093	54491226	101	0.0624
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	54492381	55031495	348	-0.3534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55031639	55156863	151	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55157134	55227663	67	0.5597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55231209	55248202	19	-0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55248603	55689495	464	-0.3678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55689528	55736630	36	-0.046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55736706	55751071	12	-0.3349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55751945	55762325	9	0.9963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	55767493	61360719	3276	-0.3719
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	61362083	61363382	2	1.0737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	61365594	67243560	3051	-0.3722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	67247120	75088513	3710	-1.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	75088528	75089870	17	-0.4001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	75089912	75109008	33	-0.821
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	4	75109140	188763651	62307	-0.3601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	914233	23729232	13827	0.7794
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	23729475	23734526	4	-0.1589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	23737083	45378456	12105	0.7989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	50124856	107512145	30516	-0.3751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	107512766	107512783	2	-2.5275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	107515701	171194238	39200	-0.3827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	171194570	171195127	3	-1.7484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	5	171196522	180360469	4801	-0.4346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	6	1014281	9929848	6459	-0.3995
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	6	9932460	9934171	3	-2.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	6	9940064	170903919	89978	-0.3764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	705284	19911822	9280	1.2105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	19912040	51591584	20732	0.9451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	51595590	51598709	2	-0.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	51605045	57238635	3349	0.9181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	57244041	78086427	5935	0.5181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	78090357	78162153	44	1.3522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	78170588	99639445	11280	0.5907
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	99640223	99640991	2	-0.6278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	99642616	120278545	10387	0.5763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	120282733	120668473	183	1.0757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	120671034	134802089	7864	0.5806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	134807646	134814991	7	0.0808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	134820715	145094394	5331	0.5733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	145099062	145106387	3	1.3712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	7	145107495	158385118	6891	0.5357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	617667	15023076	7002	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	15025276	15046986	26	0.3131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	15047014	69348741	30059	0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	69348758	69471428	67	0.3266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	69471449	70859624	905	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	70861599	70868963	4	-1.5634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	70870856	108812278	21326	0.0412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	108813477	108815003	5	-0.5288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	8	108817734	145232496	22126	0.0381
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	789932	19941897	12048	-0.3876
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	19945420	20701184	557	-2.9723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	20701305	22118102	979	-2.4369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	22118749	22119128	3	-1.3303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	9	22121633	140938752	54393	-0.3888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	415240	77107024	43997	0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	77110895	77136073	20	0.5441
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	77137125	106920100	18399	0.0348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	106922625	107206258	149	-0.9592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	107208038	111549396	2815	0.0418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	10	111550272	135225087	15379	-1.0651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	456120	49003562	30077	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	49003941	49021579	3	-1.0385
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	49023577	84583723	15031	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	84584033	84584321	2	-1.2427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	84584955	117825852	20871	0.0329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	117826028	117837940	5	-1.0323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	11	117840152	134142530	11244	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	889902	40324142	20121	0.3367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	40324293	40331853	23	-0.2889
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	40333609	42467891	1429	0.3687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	42470521	42470994	2	-0.6837
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	12	42471200	133161346	52355	0.331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	19450806	87061837	38922	-0.3898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	87062889	101804564	9071	0.3461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	101807964	101963138	124	1.094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	101974163	102326047	297	0.3375
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	102333914	102334035	2	-1.5248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	13	102335508	114987458	8198	0.3283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	20501368	40053631	10668	-0.3884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	40060516	40176826	67	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	40176843	99663847	35779	-0.3942
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	99664984	99666400	3	-1.8982
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	14	99667687	105988038	2882	-0.4457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	15	23687685	49652524	13166	0.1673
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	15	49653176	49684082	11	0.6238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	15	49695583	101884307	31343	0.0397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	653459	6632888	2728	0.682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	7132183	8196934	620	0.2819
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	8198662	8203679	6	-0.4536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	8204723	31850299	10532	0.296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	46507665	75424154	17334	-0.4056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	75426297	75427025	5	-1.8086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	16	75428196	89379936	9560	-0.4264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	987221	20534196	9348	-0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	20534255	20540226	2	-2.0572
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	20547638	49639299	10801	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	49640184	49726762	73	0.3356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	17	49729000	80917016	16756	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	329586	24570358	11733	-0.4035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	24570667	24571880	2	-2.0736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	24576252	38590023	8518	-0.3807
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	38599337	38611227	7	-2.0762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	18	38612454	77109240	22374	-0.3945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	19	284018	58878226	23946	-0.0584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	20	455764	56768912	33846	0.3049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	20	56769084	56769365	2	-0.805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	20	56771169	62219837	3434	0.2709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	21	15347621	35482434	12817	0.5727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	21	35482636	35482779	6	-0.0764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	21	35482994	47678774	7758	0.5245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	22	17423930	33767197	7138	-0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	22	33767245	49331012	9783	0.8505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	X	3157107	71288011	27429	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	X	71291327	71293259	2	-1.7779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E07_896580	X	71294641	154905589	36328	-0.0054
