Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	3218610	82203562	44814	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	82203594	82203971	2	-1.5402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	82204436	112654930	18124	0.0228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	112655595	112658524	5	1.1187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	112658790	117090730	2812	0.0168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	117094222	117096704	2	-1.5289
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	1	117111960	247813706	63359	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	484222	5588041	2638	0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	5588619	5588753	2	-1.3949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	5594923	35312906	18267	-0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	35319889	35457701	80	0.468
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	35458263	74139769	21981	0.0205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	74139996	74140010	2	-1.2755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	2	74142728	242476062	88282	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	3	2212571	197538677	106361	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	4	1053934	80751649	43839	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	4	80751736	80757048	5	-1.0794
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	4	80758914	137474055	30948	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	4	137480493	137672030	114	-0.7975
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	4	137679664	188763651	27799	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	5	914233	4671383	2403	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	5	4671474	4671598	2	-1.1052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	5	4672255	180360469	98074	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	6	1014281	170903919	96458	0.0192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	7	705284	48516632	27885	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	7	48517520	48521030	3	-1.0523
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	7	48523876	158385118	53407	0.0456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	8	617667	75352431	40919	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	8	75363792	75369122	2	-1.348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	8	75369545	145232496	40600	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	789932	107503369	47231	-0.0261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	107505687	107992141	429	-0.8073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	107992144	107994165	15	-0.1232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	107996543	108199189	135	-0.7752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	108215424	123966319	11267	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	123966952	123967760	2	1.1764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	9	123968982	140938752	8934	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	10	415240	36927691	25074	-0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	10	36927922	36931917	2	-1.0635
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	10	36933857	84065725	23570	-0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	10	84066560	84068967	2	-1.8932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	10	84073159	135225087	32197	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	11	456120	40437210	25224	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	11	40439654	40440386	2	-1.1953
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	11	40447527	134142530	52008	-0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	12	889902	40554016	20281	-0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	12	40554032	40554659	3	-1.2792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	12	40554698	133161346	53648	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	13	19450806	68271038	27542	-0.0344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	13	68275993	68279515	2	-1.5744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	13	68280517	114987458	29086	-0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	14	20501368	105988038	49432	-0.0233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	15	23687685	47763726	11947	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	15	47764386	47764401	2	-1.3518
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	15	47765970	101884307	32569	-0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	16	653459	87669407	40417	-0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	16	87670042	88053123	199	0.4334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	16	88059575	89379936	172	-0.0702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	987221	5691976	2055	-0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	5692951	5698487	6	-0.6792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	5699203	21104627	7500	-0.0282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	21109151	21110432	3	-0.9452
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	21112905	67442595	20777	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	67442868	67442930	2	-1.3593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	17	67458062	80917016	6636	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	18	329586	77109240	42645	-0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	19	284018	8973217	2688	-0.0214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	19	8979684	9005875	28	-0.7179
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	19	9007525	58878226	21228	-0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	20	455764	62219837	37279	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	21	15347621	47678774	20579	-0.0287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	22	17423930	18124182	413	0.2609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	22	18128960	32999164	6097	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	22	33006967	33286365	252	0.2459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	22	33287027	49331012	10159	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	X	3157107	48467186	20335	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	X	48469467	48469670	2	-5.0372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E09_896576	X	48470733	154905589	43387	0.0016
