Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	3208470	6984252	2358	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	6985974	6997848	10	-0.6237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	6998085	85752938	44815	-0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	85761152	85775754	10	0.5443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	85778597	120328884	20514	-0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	142745296	190682823	26080	0.6374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	190685431	190687251	5	2.2935
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	190687520	239136050	31641	0.6376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	239136227	239206188	37	0.3357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	239206315	245880329	3573	0.6388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	474222	221637990	118873	-0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221640750	221647486	8	0.3333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221650463	221656496	4	0.962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221656974	221725717	40	0.2756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221727298	242124735	12296	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	526235	13179027	6568	-0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	13182536	21756975	5019	-0.5514
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	22194169	170878764	80321	-0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	170886185	170981136	45	0.3267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	170983929	199023074	14369	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	4	1043934	137605763	74706	-0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	4	137605847	189836143	27973	0.3656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	967233	3796669	1717	0.3677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	3800875	4272375	382	-0.0604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	4272892	10185963	4632	0.392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	10186063	38092028	15095	-0.0301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	38093935	38415593	262	0.3593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	38416057	95221784	28612	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	95222612	95227992	9	-0.8279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	95228047	130252642	19185	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	130293012	175047531	28338	-0.5552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	175052039	175061023	11	-1.2335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	175062569	180293075	2156	-0.5445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	959281	23011310	15443	0.3736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	23013296	23013811	4	1.2662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	23017312	27457378	2415	0.3513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	27458360	49177868	11041	-0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	49184363	54226435	3206	0.2757
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	54226447	54432906	144	-0.0323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	54441241	55384127	561	0.2608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	55384961	56603201	754	0.5132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	56605781	63811907	954	0.2569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	63812406	65155992	666	0.5165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	65162477	65480727	187	0.2297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	65480746	66213812	349	0.5056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	66213888	71922222	3237	0.2708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	71923304	71926901	4	-1.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	71929555	76718121	2893	0.2927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	76720504	99663767	12406	-0.1472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	99664539	124275905	13975	-0.5634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	124276058	124278017	7	-1.8579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	124278434	170745844	28117	-0.5608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	671810	2657761	546	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	2660869	2766212	56	0.4789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	2766652	2904641	85	-0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	2904827	3034906	84	0.5048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	3036641	135535454	68946	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	135536950	141632727	3506	0.3662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	141632941	154278366	5889	0.6449
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	154278386	158077879	2170	0.3738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	607667	612980	4	0.3419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	617181	14699333	6704	-0.0571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	14700308	14985608	230	0.3477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	14985822	31333640	11264	-0.0427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	31335654	31336045	3	-1.357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	31336431	42325141	6221	-0.0603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	42330640	42330928	2	-1.7503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	42332262	49717935	1169	-0.0409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	49718026	49723710	5	-1.3811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	49724030	57296617	4285	-0.0749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	57297293	58214586	543	0.6136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	58220209	58220222	2	-1.4696
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	58221440	64461476	3984	0.6176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	64463179	64742877	145	-0.1122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	64745352	80219294	8816	0.6059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	80221449	80221610	2	-1.0006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	80223062	95625563	8405	0.6151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	95625579	95639721	20	0.2282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	95645526	104914596	5464	0.6186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	104915385	104918369	2	-0.5229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	104919654	132295833	16647	0.6074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	132297207	132299463	3	-1.3854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	132300394	145304484	7576	0.6097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	779932	857513	78	-0.6002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	859595	874614	20	-1.4662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	876138	19978975	11968	-0.5638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	19979584	21093754	837	-1.536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	21094379	21112462	16	-3.6598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	21112645	22249604	730	-1.4049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	22256091	92598877	25189	-0.55
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	92601271	92601435	2	-2.8735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	92610601	114106399	13845	-0.5356
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	114110749	114110946	2	-2.7438
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	114111038	140058573	15163	-0.5393
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	10	405240	20229733	14060	-0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	10	20230766	20880641	548	0.3025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	10	20880751	135075077	66215	-0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	446120	64349484	34947	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	65427086	78693927	6699	1.0193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	78693947	78693962	2	-0.7606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	78694008	89482261	6495	1.0245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	89482641	89486919	3	0.0857
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	89490494	101224991	7776	0.9615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	101225143	101234480	4	0.2461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	101239284	102727412	818	0.9489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	102728571	133647740	20465	-0.5534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	760163	16846736	9109	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	16852060	16871622	14	-1.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	16875211	24284083	4584	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	24285021	24286539	4	-0.927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	24288211	79851788	30289	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	79852215	80150332	210	0.3615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	80150818	131671419	29704	-0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	18348806	43814241	16133	-0.0174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	43814646	43817659	3	-1.3677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	43818079	91365426	25916	-0.0332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	91365835	114005560	14547	-0.5649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	19571208	83369526	36490	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	83373145	83408379	32	0.549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	83409724	89575609	3686	-0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	89577397	98081815	5886	0.3685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	98082473	98099303	17	-0.1132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	98101056	98196498	94	0.3855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	98201216	105059083	3218	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	15	21238778	62615260	23177	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	15	62616834	62616883	2	-1.8136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	15	62617722	99701830	21332	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	16	593460	69396838	28809	-0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	16	69403572	69757550	66	0.5431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	16	69762695	72339384	1537	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	16	72339532	87907437	10408	-0.5632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	17	933971	48083858	20958	-0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	17	48083872	78510305	16014	0.3596
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	319586	14638457	8196	-0.4826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	14643028	37385579	12353	-0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	37387744	37388840	4	-1.1958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	37389349	46480915	5824	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	46481269	50132918	2400	-0.5562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	50137912	50195819	25	-1.3959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	50198384	75210228	13795	-0.5614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	19	235018	23844832	8961	-0.529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	19	32932334	63570038	14961	-0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	403764	29547133	16946	-0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	29548076	35133976	2619	0.6046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	35134059	35164912	85	0.3195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	35173903	53692611	12352	0.6108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	53708999	53739570	28	0.2846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	53748052	59910348	4607	0.6097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	59921204	61690281	637	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	21	14269492	46503202	20574	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	22	15803930	47717016	16913	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	X	3167107	154558783	63697	0.0016
