Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	3218610	7061665	2358	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	7063387	7075261	10	-0.6237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	7075498	85980350	44877	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	85988564	86003166	10	0.5443
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	86006009	120527361	20513	-0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	149881398	192416200	26077	0.6372
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	192418808	192420628	5	2.2935
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	192420897	241069427	31640	0.6376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	241069604	241139565	37	0.3357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	1	241139692	247813706	3572	0.6389
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	484222	221929746	118864	-0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221932506	221939242	8	0.3333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221942219	221948252	4	0.962
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	221948730	222017473	40	0.2756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	2	222019054	242476062	12297	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	2212571	13204027	6566	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	13207536	21781971	5020	-0.5512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	22219165	169396070	80316	-0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	169403491	169498442	45	0.3267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	3	169501235	197538677	14369	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	4	1053934	137386313	74708	-0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	4	137386397	188763651	27976	0.3655
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	914233	3743669	1717	0.3677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	3747875	4219375	382	-0.0604
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	4219892	10132963	4634	0.3919
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	10133063	38056271	15095	-0.0301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	38058178	38379836	262	0.3593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	38380300	95196028	28611	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	95196856	95202236	9	-0.8279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	95202291	130224743	19184	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	130265113	175114925	28338	-0.5552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	175119433	175128417	11	-1.2335
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	5	175129963	180360469	2156	-0.5445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	1014281	22903331	15444	0.3736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	22905317	22905832	4	1.2662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	22909333	27349399	2415	0.3513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	27350381	49069909	11040	-0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	49076404	54118476	3208	0.2755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	54118488	54324947	144	-0.0323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	54333282	55276168	561	0.2608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	55277002	56495242	755	0.5127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	56497822	63753948	954	0.2569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	63754447	65099271	666	0.5165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	65105756	65424006	187	0.2297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	65424025	66157091	349	0.5056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	66157167	71865501	3237	0.2706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	71866583	71870180	4	-1.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	71872834	76661401	2893	0.2927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	76663784	99557046	12405	-0.1472
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	99557818	124234206	13979	-0.5632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	124234359	124236318	7	-1.8579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	6	124236735	170903919	28120	-0.5607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	705284	2691235	546	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	2694343	2799686	56	0.4789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	2800126	2938115	85	-0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	2938301	3068380	84	0.5048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	3070115	135884914	68949	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	135886410	141986247	3506	0.3662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	141986461	154647433	5887	0.6448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	7	154647453	158385118	2170	0.3738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	617667	622980	4	0.3419
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	627181	14654962	6704	-0.0571
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	14655937	14941237	230	0.3477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	14941451	31214098	11264	-0.0427
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	31216112	31216503	3	-1.357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	31216889	42205984	6221	-0.0603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	42211483	42211771	2	-1.7503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	42213105	49555382	1170	-0.0403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	49555473	49561157	5	-1.3811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	49561477	57134063	4284	-0.0749
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	57134739	58052032	543	0.6136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	58057655	58057668	2	-1.4696
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	58058886	64298922	3986	0.617
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	64300625	64580323	145	-0.1122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	64582798	80056739	8818	0.6057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	80058894	80059055	2	-1.0006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	80060507	95556387	8404	0.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	95556403	95570545	20	0.2282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	95576350	104845420	5465	0.6186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	104846209	104849193	2	-0.5229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	104850478	132226651	16650	0.6073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	132228025	132230281	3	-1.3854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	8	132231212	145232496	7576	0.6097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	789932	867513	78	-0.6002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	869595	884614	20	-1.4662
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	886138	19988975	11970	-0.5638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	19989584	21103754	837	-1.536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	21104379	21122462	16	-3.6598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	21122645	22259604	730	-1.4049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	22266091	93559056	25194	-0.5497
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	93561450	93561614	2	-2.8735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	93570780	115066578	13849	-0.5354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	115070928	115071125	2	-2.7438
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	9	115071217	140938752	15164	-0.5393
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	10	415240	20189727	14060	-0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	10	20190760	20840635	548	0.3025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	10	20840745	135225087	66213	-0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	456120	64592908	34943	-0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	65670510	79016279	6700	1.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	79016299	79016314	2	-0.7606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	79016360	89842613	6494	1.0245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	89842993	89847271	3	0.0857
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	89850846	101719781	7773	0.9614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	101719933	101729270	4	0.2461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	101734074	103222202	817	0.9488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	11	103223361	134142530	20463	-0.5535
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	889902	16955469	9107	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	16960793	16980355	14	-1.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	16983944	24392816	4583	-0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	24393754	24395272	4	-0.927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	24396944	81327657	30287	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	81328084	81626201	210	0.3615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	12	81626687	133161346	29704	-0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	19450806	44916241	16131	-0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	44916646	44919659	3	-1.3677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	44920079	92567425	25914	-0.0332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	13	92567834	114987458	14547	-0.5649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	20501368	84299773	36487	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	84303392	84338626	32	0.549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	84339971	90505856	3687	-0.0265
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	90507644	99012062	5886	0.3685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	99012720	99029550	17	-0.1132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	99031303	99126745	94	0.3855
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	14	99131463	105988038	3218	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	15	23687685	64828207	23176	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	15	64829781	64829830	2	-1.8136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	15	64830669	101884307	21331	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	16	653459	73781883	30346	-0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	16	73782031	89379936	10408	-0.5632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	17	987221	50728859	20957	-0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	17	50728873	80917016	16015	0.3595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	329586	14648457	8196	-0.4826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	14653028	39131581	12353	-0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	39133746	39134842	4	-1.1958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	39135351	48226917	5824	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	48227271	51878920	2399	-0.5559
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	51883914	51941821	25	-1.3959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	18	51944386	77109240	13793	-0.5614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	19	284018	24052992	8961	-0.529
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	19	28240494	58878226	14961	-0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	455764	30083472	16949	-0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	30084415	35700562	2619	0.6046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	35700645	35731498	85	0.3195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	35740489	54259204	12352	0.6108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	54275592	54306163	28	0.2846
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	54314645	60476953	4607	0.6097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	20	60487809	62219837	637	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	21	15347621	47678774	20573	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	22	17423930	49331012	16912	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_E10_896588	X	3157107	154905589	63714	0.0018
