Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	61735	7943877	3932	0.0174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	7944214	7944264	2	-1.3015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	7947273	12845863	2594	-0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	12852748	12927107	37	-0.3828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	12927856	16153497	1853	-0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	16153536	16154966	8	0.8944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	16155010	16806925	286	0.0168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	16807224	17329637	206	0.2879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	17330149	25583341	5246	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	25593128	25646744	26	0.7473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	25646946	62275920	21587	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	62279594	62285367	8	-1.1866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	62288311	72768498	7263	-0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	72768916	72811133	45	-1.136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	72811148	102686703	19340	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	102687572	102758810	52	-0.2997
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	102759202	104221531	691	-0.0292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	104221631	104225568	10	-0.9735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	104239689	104303403	14	0.834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	104303501	106019310	921	-0.0447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	106019370	106022375	14	0.9606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	106024055	107654220	1081	-0.0498
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	107655602	107663495	11	-1.298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	107665433	110221727	1560	-0.0197
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	110224384	110227515	15	0.9178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	110232974	110242953	18	2.114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	110244998	110253130	19	0.2159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	110256624	112690326	1936	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	112695965	112697390	25	0.426
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	112705956	120121938	4745	-0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	120122143	120150949	40	0.3047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	120151588	121338948	397	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	121340237	144842558	62	0.322
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	144849539	144868360	5	1.8637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	144869084	147831183	1074	0.039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	147844790	149844995	304	0.253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	149850351	152555706	1414	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	152555767	152579468	25	-0.9409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	152579621	152759678	180	-0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	152761923	152768700	37	-1.442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	152773905	153140118	274	-0.062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	153141227	153141333	2	-1.6403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	153141699	158866573	3345	-0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	158868501	158869759	2	1.7862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	158874818	192037153	22718	-0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	192045373	192060662	20	-0.4176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	192060745	195819871	2585	-0.0303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	195820167	195820337	2	-1.8671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	195820471	196727850	588	-0.0317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	196731035	196801850	89	-0.4991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	196801987	249224388	35959	-0.015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	12784	3732546	2569	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	3732587	3736538	4	-1.0527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	3742071	34691069	21524	-0.0174
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	34699315	34736513	45	-0.3014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	34737057	35975973	878	-0.0409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	35977790	35987916	6	-1.5948
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	35987947	40990662	3766	-0.0293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	40990752	40991438	2	-1.4927
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	40991806	49535768	6112	-0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	49537669	49541190	4	-1.406
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	49545041	52754561	2282	-0.0451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	52754728	52781397	31	-0.6247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	52781412	64367111	7365	-0.0295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	64367587	64368260	3	-1.6458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	64369037	76551346	7963	-0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	76551849	76594974	41	-0.3022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	76595855	229262292	88861	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	229264414	229266374	2	-2.9717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	229268856	230949707	1092	-0.0241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	230949767	230955261	4	-0.8283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	230958847	233241734	1213	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	233241903	233325924	57	0.2096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	233335141	243089456	6179	-0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	60345	8821804	7755	-0.0367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	8825367	8866808	29	0.5737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	8867202	26611649	12278	-0.0168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	26611667	26611885	4	-2.5465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	26611898	53023211	15720	-0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	53028375	53038902	34	-0.6414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	53038944	65189235	9561	-0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	65189319	65217656	61	0.2256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	65218409	68746164	2415	-0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	68746259	68747413	14	-1.1149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	68748758	75415863	4872	-0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	75421170	75819252	127	0.3216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	75822459	84102222	4631	-0.0297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	84105433	84106166	2	-3.208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	84110967	84699871	305	-0.0436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	84700296	84702136	11	-0.576
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	84702161	85486753	460	-0.0366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	85487212	85652380	97	-0.2343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	85653433	98944511	5441	-0.0251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	98944547	98949421	35	0.5023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	98950964	104276827	3052	-0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	104278582	104279399	2	-1.2248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	104288542	119350345	9585	-0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	119351398	119353938	5	-0.9508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	119355411	129786739	6110	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	129786753	129806236	42	-1.1944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	129806924	162226738	20108	-0.0194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	162226794	162226821	3	-1.2457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	162226837	162508268	172	-0.0826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	162512657	162625995	70	-1.221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	162626572	168730180	3446	-0.0384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	168733402	168738628	2	-2.2534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	168739827	177743001	5907	-0.0314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	177743488	177744570	2	-1.3473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	177745468	189359903	7329	-0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	189360278	189371014	15	-0.83
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	189372351	192878045	2497	-0.0254
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	192878195	192882903	17	-1.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	192886435	197896118	2705	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	12281	3874896	1640	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	3877790	4184290	86	0.2891
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	4184697	5162389	785	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	5162491	5181189	14	0.4256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	5181737	9471258	2731	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	9478849	9479206	3	2.5229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	9479345	9650598	48	0.2528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	9653990	10210390	499	0.0305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	10214160	10244613	43	0.4462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	10244955	26288818	11736	-0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	26291985	26294776	3	-1.6484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	26295174	32400551	3898	-0.0247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	32400565	32401513	4	-1.2295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	32405314	34779054	1348	-0.0202
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	34786500	34819110	34	-0.4718
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	34819211	46130702	7260	-0.1387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	46136077	69218152	12194	0.2998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	69220383	69372003	32	-0.1796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	69374941	69485979	64	-1.5928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	69489335	86450196	10431	0.3395
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	86455895	94273330	4678	-0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	94273813	94276480	2	-1.4606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	94280089	100806181	3942	-0.0911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	100806696	153952964	31596	0.3305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	153955940	158632072	3151	-0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	158634769	158639268	2	-1.5779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	158639667	171268082	8013	-0.0228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	171268094	171273158	6	-0.863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	171274014	171444452	101	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	171445938	171467530	14	-0.5251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	171471372	190775644	13041	-0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	190776544	191027923	71	0.259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	15532	2038142	1060	0.0539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	2044129	2063679	19	-1.0853
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	2069531	5640744	3294	-0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	5641346	5641845	3	-1.1834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	5646827	8318413	2267	-0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	8320923	8321506	3	-1.261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	8321995	12815780	3573	-0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	12815865	12826650	10	0.9845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	12833857	15716127	1979	-0.0162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	15718492	15720597	12	-0.7325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	15723346	18442232	1760	-0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	18442952	18454010	5	-0.7799
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	18458550	19458788	629	-0.0383
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	19459021	19459627	3	-1.078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	19462271	49979858	16408	-0.0225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	49980603	50101871	60	-0.4931
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	50103219	68829347	12134	-0.2348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	68846303	70254898	14	0.5011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	70254900	81677352	7044	-0.2291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	81677745	81722135	51	0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	81732511	137810516	34618	-0.237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	137810944	137815711	12	-1.1319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	137816468	155472055	11270	-0.2272
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	155472133	155482715	18	0.2709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	155482729	177132443	14806	-0.2243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	177133658	177391446	38	0.1013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	177391977	179065642	1029	-0.2326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	179066006	179108197	44	0.0939
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	179108248	180696384	902	-0.2077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	180714471	180790320	4	0.2851
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	149661	315197	129	0.1136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	318804	323084	4	-0.9618
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	323326	19040119	14661	-0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	19042181	19042818	3	-3.656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	19044702	26840880	5530	-0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	26843894	26904759	9	0.6156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	26904828	29850366	1421	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	29850380	29901576	18	-0.8055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	29908469	31348200	711	0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	31348470	31348648	3	1.2974
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	31351035	32518769	478	0.0382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	32527284	32540477	6	-0.8578
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	32540611	32622194	34	-0.1095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	32624304	32626618	6	-0.9814
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	32650612	33938743	810	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	33942011	33942705	6	-1.2221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	33944586	53931084	12932	-0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	53931151	53931855	7	-0.829
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	53935348	57154816	1942	-0.0277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	57158953	57160897	4	-0.9078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	57161200	62486911	902	0.036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	62487397	62494557	11	-0.4475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	62495863	62923825	239	-0.0229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	62925642	62927892	3	-1.2292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	62928304	71727564	5529	-0.0343
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	71728866	71729002	2	-1.8818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	71729019	74592225	1886	-0.0376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	74592457	74597341	8	-2.5801
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	74601410	75000558	249	-0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	75000855	75008944	2	1.219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	75008946	77440094	1521	-0.0365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	77440818	77443219	7	-1.082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	77443247	78962889	989	-0.0461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	78969065	79032317	107	-0.6331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	79032592	171051005	59781	-0.0213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	43355	6875461	3452	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	6876185	6929662	16	0.5634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	6932776	38294996	23970	-0.0233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	38297835	38415062	137	0.3516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	38415365	54386505	10996	-0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	54386509	54386517	5	-1.5012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	54393488	64941887	3313	0.0237
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	64942849	65060564	27	0.3469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	65066173	71997205	4023	-0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	71997529	72042912	19	0.4152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	72043041	76495157	1298	0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	76495261	76496578	4	-0.9232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	76497164	83300296	4632	-0.0298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	83300467	83300615	2	-1.3161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	83300730	97401932	8842	-0.0292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	97401959	97402475	7	-0.8303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	97404240	102089969	2050	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	102091735	102355428	30	0.4213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	102355446	109437757	4567	-0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	109437772	109441212	10	0.5347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	109441244	141759994	19995	-0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	141760830	141792107	46	0.324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	141795281	143218858	946	0.0614
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	143218968	143532998	91	0.3105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	143543851	143909445	283	-0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	143911624	144066947	39	-0.5374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	144074929	159127004	9695	-0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	31254	158062	5	0.7081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	161222	2701799	2117	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	2701934	2703899	8	-0.9284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	2707171	4003305	1675	-0.037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	4003463	4003478	2	-2.2473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	4003561	4075671	157	-0.0491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	4075796	4077190	6	-0.9205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	4078053	6827186	3760	-0.0464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	6827199	6839705	4	0.8921
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	6840297	8385797	627	0.0551
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	8386150	8386357	3	-1.6025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	8386442	12001123	2940	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	12034307	12551450	137	0.3393
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	12551618	24972187	10400	-0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	24974443	24984333	27	0.5243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	24991104	39230325	9030	-0.018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	39230659	39386965	60	0.7466
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	39388299	89765902	28259	-0.022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	89767183	89772441	4	-1.6236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	89773250	95557312	3496	-0.0215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	95557552	95558115	8	0.7402
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	95559092	98708875	2154	-0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	98710491	115631436	9963	0.334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	115632043	115638350	15	-0.259
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	115638395	115640817	8	0.373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	115640908	115641731	13	-0.3989
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	115650697	143743977	20204	0.3454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	143749718	143752235	4	-0.5349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	143752744	144698669	349	0.3388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	144698815	144706809	8	0.8621
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	144706884	146298155	510	0.3928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	46587	1342328	1345	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	1342721	1343649	4	-1.2138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	1343824	22492889	18523	-0.022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	22501913	22502699	2	-3.5785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	22509340	23361805	580	-0.0434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	23363115	23373484	8	-0.5796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	23378488	24503816	797	-0.016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	24504125	24517682	19	-0.9648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	24519684	29969868	4161	-0.0436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	29969969	29972111	3	1.1135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	29972177	41842529	5906	-0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	41846811	41985187	8	1.1328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	42023107	42024172	3	-1.3164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	42065266	44629223	111	0.2189
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	44727859	44855737	36	0.9242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	44866028	71038069	399	0.2334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	71039044	72028574	852	-0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	72032393	72049604	23	0.6236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	72056397	90514115	13354	-0.022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	90522594	90554219	3	1.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	90557957	93609577	2034	-0.0245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	93609668	93610132	3	-1.0732
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	93612959	135935185	29321	-0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	135937012	135955171	9	0.5438
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	135956622	138211368	1303	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	138214105	138216412	3	1.059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	138217797	140942441	999	0.0138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	140942955	141091394	116	0.2565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	72759	133665	16	0.3473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	135656	235107	56	-0.193
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	239600	364065	89	-0.4958
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	364399	3943279	3116	-0.2412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	3946610	3947069	5	-6.4331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	3947827	4536190	610	-0.2289
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	4538472	5996375	1145	0.8354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	5997495	6184807	165	0.6238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6184844	6239803	53	0.8157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6249591	6393610	144	0.6153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6398978	6398982	4	-0.3136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6398984	8437638	1828	0.6684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	8439436	9654388	1044	1.1914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	9659627	15930699	5134	0.8503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15930737	15934921	12	0.2918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15935675	17004055	852	0.8142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17006664	17074414	75	1.4424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17074578	17368618	220	0.8642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17368841	17476653	93	1.1287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17476686	17485587	10	0.8477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17495014	17795677	199	1.5058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17817578	17971816	11	2.3474
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	18029825	18196769	14	0.6311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	18199813	19335706	887	1.3228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	19338645	20383905	886	1.5914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	20385570	21067683	582	1.3435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21072872	21656997	405	1.5582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21660736	21678059	15	0.9702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21680164	21711204	19	1.6071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21715808	24152448	1374	0.8636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24153310	24370937	172	0.1947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24372305	24377674	4	1.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24377675	24378908	11	1.5296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24378951	24426361	48	0.8374
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24426473	26599244	1506	0.1545
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26604155	26664932	52	0.7251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26665321	26739565	62	0.1743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26741149	26768622	23	0.816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26769225	26797947	19	0.1648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26798463	26824992	30	0.4841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26828325	26834031	5	0.1266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26837060	26910329	38	0.6512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26913852	27847428	602	0.1459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	27849087	27869387	22	0.9205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	27872006	29496456	1220	0.1677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	29499570	30128658	543	0.698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30130884	30704139	448	0.1538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30709448	30748498	25	1.1397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30750033	31246510	402	0.1798
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	31251334	31251779	11	-2.2723
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	31251822	32834243	1002	0.1696
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	32835308	32835725	2	-1.6685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	32844516	46225377	6249	0.0993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	46236003	47030900	90	0.5241
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	47035627	47068227	37	0.1116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	47068243	47150470	57	0.5321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	47249587	48771950	496	0.0448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	48837810	49389968	34	0.3484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	49390308	51753107	1414	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	51754998	51795395	14	0.4741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	51795461	67309010	11047	-0.0324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	67310955	67314430	12	-0.6453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	67314446	67357990	45	-0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	67357993	67361914	4	0.7121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	67362181	105144942	24336	-0.0157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	105148688	105224370	49	0.2295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	105224669	107980775	1974	-0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	107984320	108016370	29	-1.2162
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	108019224	135422505	19861	-0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	135423087	135506704	16	0.3071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	198510	217011	8	0.1549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	217140	1648648	480	-0.2361
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	1649887	1654761	8	0.4563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	1657127	3133174	702	-0.203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	3140100	4239054	592	0.0442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	4250013	4328172	25	-0.4324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	4335878	4967396	660	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	4967650	4976865	41	0.6132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	4976878	5793583	798	-0.0334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	5794245	5809139	22	-0.6096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	5809338	7813040	1504	-0.014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	7813460	7832258	6	-0.6585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	7837009	8896255	742	-0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	8899400	8899668	3	-1.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	8900394	18940322	7167	-0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	18940856	18975452	78	0.3644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	18977660	55363340	21818	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	55374032	55439990	47	0.3992
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	55442318	67501626	6256	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	67503656	67747160	69	0.3292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	67749258	134944770	46111	-0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	150442	869278	422	0.0457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	869316	874029	14	-0.9789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	875354	8366601	5123	-0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	8368213	8584672	83	0.4164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	8594894	9442850	476	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	9454548	9467809	5	0.7283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	9472365	9617083	73	0.0541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	9619168	9734970	35	0.7755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	9735686	11512492	1187	-0.0234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	11512531	11543406	29	-0.761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	11552192	19698168	5551	-0.0249
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	19698439	19701825	2	-2.7579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	19702342	30239314	7582	-0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	30239419	30243590	18	-0.6288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	30243614	33301406	2276	-0.0131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	33301426	33308360	27	-0.6194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	33308387	133778189	62161	-0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	19026949	72476988	35149	-0.0288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	72477555	72480556	4	-2.6886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	72480605	115108397	29135	-0.0271
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	19002124	20422583	189	0.2854
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	20423372	21398310	735	-0.2642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	21402472	22459450	685	-0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	22459522	22983223	473	0.2392
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	22988022	22999402	7	-0.2423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	22999558	41607634	11739	-0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	41608358	41653977	14	-0.7818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	41657249	42979075	847	-0.0307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	42986168	42997307	13	-0.6301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	43000154	70012801	16982	-0.0222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	70013137	70036986	23	0.3689
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	70041487	74001123	2617	-0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	74006707	74020979	8	-0.9911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	74029900	106428390	20778	-0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	106429968	106499250	30	0.3569
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	106503700	106530364	10	-0.102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	106530687	106569463	18	0.8364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	106574118	106872062	140	0.0449
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	106874361	106918108	52	-0.5626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	106918649	107285437	224	-0.0331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	20016328	22755172	433	0.2611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	22755953	23266351	294	0.041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	23277448	23290800	4	-1.3583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	23296600	30369914	4364	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	30370031	30631090	76	0.2264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	30643096	76878362	29167	-0.015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	76891241	76902179	23	1.041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	76902194	102420602	17669	-0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	102420807	102469040	11	0.3502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	60777	95481	14	0.148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	95579	2651291	874	-0.0906
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	2653156	2738179	19	0.6007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	2740841	7894335	4576	-0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	7896313	7902945	2	-1.5367
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	7905265	12713793	4072	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	12713934	12714043	2	-1.5906
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	12714112	14756287	1551	-0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	14759768	15049998	36	0.4037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	15051757	18429385	1666	0.0487
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	18551587	18557211	3	1.2439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	18594400	19945808	714	-0.176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	19945899	19961581	18	0.2592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	19961646	22247353	1223	-0.1786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	22251512	22251808	2	-1.6079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	22252507	31943672	5269	-0.136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	31944081	31957368	5	-0.4972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	31959374	33999879	341	0.2122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	34002622	34459709	155	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	34466571	34757071	169	0.5445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	34760967	46504414	141	0.0642
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	46507665	53455524	4433	-0.2187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	53455648	53469807	7	0.4006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	53469929	55796594	2026	-0.2149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	55798222	55798779	3	2.4809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	55804348	55809224	6	0.6102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	55809466	55816646	5	-0.7631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	55816705	90287535	25086	-0.1205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	526	7258027	4100	-0.0341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	7265349	7265806	2	-1.8541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	7266476	16654301	6404	-0.0567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	16657331	16774149	21	0.6055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	16779185	18358946	914	-0.029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	18358949	18411397	14	-1.2839
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	18411923	18465221	13	-0.5397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	18469197	21191359	1174	-0.0222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	21192430	21249873	13	0.3636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	21250418	21474289	101	0.0379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	21477343	25446035	343	0.22
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	25446918	25455185	4	-0.8398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	25455929	37863922	6997	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	37867745	37868688	6	0.6285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	37868762	39423090	868	0.0671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	39423103	39430531	19	1.291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	39432724	44163098	2513	-0.1879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	44165803	44408674	131	0.4747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	44428681	56212100	7406	-0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	56212514	56214094	4	-1.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	56217398	81049726	14248	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	11543	63762300	40417	-0.0222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	63767140	63767922	3	-2.2066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	63775595	78015057	10385	-0.0414
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	90910	35849309	16823	-0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	35849322	35861848	23	0.7966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	35866744	52131813	8113	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	52142352	52148197	11	-1.2243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	52154905	55312612	2062	0.0301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	55313000	55313817	2	-1.5348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	55314287	55326613	7	0.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	55330654	55347674	11	0.5159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	55347963	56273057	447	0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	56278050	56286293	7	1.0675
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	56288941	59097854	1848	-0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	61305	61675	10	0.4182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	61690	1582207	1230	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	1590257	1593893	5	-1.0649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	1597946	4075837	1735	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	4076337	4077219	5	-0.9884
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	4085669	23725528	15515	-0.0245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	23726704	23782648	40	0.284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	23785257	26209790	1476	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	26210452	29641265	100	0.2394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	29648981	38139570	4414	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38140100	38407359	244	0.6216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38411406	38424222	8	0.173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38425608	38550444	93	0.6318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38551295	38621456	43	1.2043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38621842	41978133	2594	-0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	41978970	41980858	2	-1.387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	41981117	47918042	4116	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47919555	49493745	1013	0.8705
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49495389	49496768	4	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49499016	49554653	39	0.6131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49556878	49988935	327	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49994667	49999884	4	0.8536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50000831	50054587	42	-0.0274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50055616	50633011	428	1.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50633472	50968918	217	0.6001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50972956	51599878	468	-0.026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51602488	51854481	232	0.6646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51860305	51883621	22	1.2312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51884576	52423582	388	0.0999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52427319	52427476	2	-1.124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52428220	52546810	82	-0.0285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52547660	52548367	3	0.8769
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52549145	52594937	48	-0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52595247	52618934	27	0.5871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52619796	52644868	24	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52647808	52658651	38	1.3065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52662574	54700402	1701	1.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	54701230	56462393	1442	0.7519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56463551	56692335	197	0.9895
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56695582	56882238	146	1.4117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56888147	56907442	18	0.657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56910892	56938227	17	1.4401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56941728	58835835	1488	0.7436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58836417	58899218	74	1.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58899565	58926438	29	-0.2898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58927190	58939031	19	1.0262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58942877	58985905	32	-0.3507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58986719	59042416	47	0.4195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59044356	59151630	75	-0.2357
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59155840	59157134	3	1.9229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59158923	59226104	50	1.0651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59227255	59327921	90	1.6362
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	59328730	62956153	2033	0.8709
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	21	10736871	11052629	84	-0.2961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	21	11053339	28280513	9931	-0.0345
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	21	28282660	28282852	3	-1.7322
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	21	28283604	48096957	14383	-0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	16052528	16894264	107	0.3062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	16894625	24791494	4744	0.0784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	24793239	24859617	35	0.2634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	24859667	25656233	573	-0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	25656250	25918709	300	0.6731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	25922342	39290920	9710	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	39295255	39296904	3	-2.8275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	39299114	40793260	758	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	40794590	40794820	2	-1.2439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	40797672	42892439	1196	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	42892582	42950491	27	0.5702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	42955431	45394144	1823	-0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	45394740	45396585	5	-0.8369
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	45397507	47833613	1680	-0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	47834105	47835570	2	-1.1278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	47836412	51234455	2600	0.0277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	168477	56791711	32891	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	56797633	56803005	3	1.045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	56803063	58473306	762	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	58473565	61923828	29	0.3593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	61932764	76353650	6472	0.0148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	76362292	76378656	2	-1.8777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	76378658	150292898	42004	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	150293934	150295459	2	-2.0456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	150296555	154768396	2305	0.0331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	154772341	154784326	29	-0.7573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	154785778	155182354	98	0.0295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	2650438	6101425	871	-2.421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	6107901	6424299	128	-3.6526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	6426233	19063565	4424	-2.9906
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	19068122	21088297	944	-3.4261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	21088485	23859163	1053	-3.0004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	23859468	26427522	566	-3.4065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	26430674	26510575	27	-1.9482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	26510799	27436702	96	-3.9698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	27444915	27720551	91	-2.6297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	27721084	28277692	195	-3.5808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	28289727	28322019	13	-5.1594
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	28322083	28423938	43	-3.2926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	Y	28438116	59018259	183	-2.569
