Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	3208470	194086494	95908	-0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	194086790	194086960	2	-1.8671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	194087094	223830839	19118	-0.012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	223831714	223834851	3	-1.2093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	223842585	226869388	1503	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	226874151	226874165	2	-1.146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	226874989	236645927	6983	-0.0155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	236648542	236649388	5	-0.9524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	1	236650323	245880329	5484	-0.0251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	2	474222	242124735	131194	-0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	526235	2978351	285	-0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	2978375	2982742	3	-1.1738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	2983347	179225695	95759	-0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	179226182	179227264	2	-1.3473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	3	179228162	199023074	10267	-0.019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	1043934	39372021	23878	-0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	39375419	44386071	2558	-0.2409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	44389833	44491449	57	0.0863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	44495741	44767553	121	-0.2495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	44767811	44887324	76	0.1164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	44887622	45825459	462	-0.2619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	45830834	86669220	20011	0.3245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	86674919	94492353	4263	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	94492836	94495503	2	-1.4606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	94499112	101025204	3721	-0.088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	101025719	154172414	28926	0.3354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	4	154175390	189836143	18602	-0.021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	967233	5693744	3261	-0.0214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	5694346	5694845	3	-1.1834
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	5699827	8371413	2023	-0.0198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	8373923	8374506	3	-1.261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	8374995	45341979	20620	-0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	5	45344120	180293075	74500	-0.2299
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	959281	151799735	85446	-0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	151799998	151835764	23	-0.3926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	6	151836088	170745844	10950	-0.0215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	7	671810	158077879	81273	-0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	607667	98778051	53787	-0.0218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	8	98779667	145304484	27693	0.339
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	9	779932	140058573	67981	-0.0141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	405240	4526190	2570	-0.2537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	4528472	6036381	970	0.8475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6037501	6224813	165	0.6238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6224850	6279809	53	0.8157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6289597	6433616	144	0.6156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6438984	6438988	4	-0.3136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	6438990	8477644	1583	0.6827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	8479442	9618580	916	1.2011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	9809288	13396870	2732	0.7836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	13397328	15509552	1752	0.9861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15509980	15948984	360	0.7512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15952964	15974927	19	0.387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	15975681	17044061	780	0.8115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17046670	17114420	68	1.4291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17114584	17408624	214	0.8687
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17408847	17516659	93	1.1287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17516692	17525593	10	0.8477
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	17535020	19392650	1036	1.358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	19396249	20423911	802	1.5968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	20425576	21107689	547	1.3415
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21112878	21697003	397	1.5653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21700742	21718065	15	0.9702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21720170	21751210	19	1.6071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	21755814	24192454	1346	0.8649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24193316	24428294	174	0.1971
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24428433	24466367	34	0.8513
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	24466479	26639250	1424	0.1526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26644161	26704938	52	0.7244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26705327	26779571	54	0.1554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26781155	26808628	23	0.816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26809231	26837953	19	0.1648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26838469	26864998	30	0.4841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26868331	26874037	5	0.1266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26877066	26950335	38	0.6512
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	26953858	27887434	472	0.1461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	27889093	27909393	22	0.9205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	27912012	29536462	1173	0.1646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	29539576	30168664	529	0.6963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30170890	30744145	442	0.1502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30749454	30788504	25	1.1397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	30790039	32874249	1385	0.173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	32875314	32875731	2	-1.6685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	10	32884522	135075077	58319	-0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	446120	3089750	913	-0.2314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	3096676	8852831	3589	-0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	8855976	8856244	3	-1.1489
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	11	8856970	133647740	72714	-0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	760163	19589435	10637	-0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	19589706	19593092	2	-2.7579
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	12	19593609	131671419	63265	-0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	18348806	27516160	5104	-0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	27516175	27516186	2	-1.4155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	27516198	32246568	3295	-0.0184
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	32247845	32249057	3	-1.7126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	13	32252968	114005560	48196	-0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	19571208	20408527	546	-0.2416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	20502789	67865945	26017	-0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	67866552	67867022	4	-0.9196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	14	67868658	105059083	22850	-0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	15	21238778	99701830	44492	-0.0168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	593460	27770320	12856	-0.0866
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	27770505	27770524	2	-1.2588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	27770636	30459232	499	-0.0318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	30459978	30697769	85	0.1721
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	16	30697932	87907437	27394	-0.1453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	933971	26728247	11500	-0.0391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	26732281	26876773	71	0.1796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	17	26878925	78510305	25398	-0.0275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	319586	13937893	8062	-0.0255
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	13938537	13942635	4	-1.2368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	18	13942779	75210228	34571	-0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	19	235018	63570038	23941	-0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	403764	37572984	21126	-0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	37573514	37840773	244	0.6219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	37844820	37857636	8	0.173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	37859022	37983858	93	0.6318
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	37984709	38054870	43	1.2043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	38055256	47153793	6141	-0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47156392	47346985	95	0.2066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47347473	47351449	5	-0.0789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47352962	47574151	142	0.6832
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	47576769	48927152	682	0.8963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	48928796	48930175	4	0.052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	48932423	48988060	39	0.6131
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	48990285	49422342	327	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49428074	49433291	4	0.8536
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49434238	49487994	42	-0.0274
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	49489023	50066418	390	1.03
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50066879	50402325	203	0.5999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	50406363	51033285	410	-0.0246
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51035895	51287888	232	0.6649
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51293712	51317028	15	1.2138
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	51317983	52028344	429	0.0522
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52028654	52052341	27	0.5871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52053203	52078140	20	-0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	52101533	54133809	1568	1.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	54134637	55895799	1310	0.7473
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	55896957	56125741	176	0.9809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56128988	56315644	146	1.4117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56321553	56340848	18	0.657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56344298	56371633	17	1.4401
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	56375134	58269230	1450	0.744
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58269812	58332613	74	1.0268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58332960	58359833	29	-0.2898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58360585	58372426	19	1.0262
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58376272	58419300	32	-0.3507
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58420114	58475811	47	0.4195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58477751	58585025	65	-0.2247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58589235	58590529	3	1.9229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58592318	58659499	50	1.0651
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58660650	58761316	65	1.6459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58762125	58764736	10	0.8382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58766680	58846673	68	1.0785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	20	58846818	61690281	1401	0.8317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	21	14269492	46503202	20570	-0.0218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	15803930	46212277	15691	-0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	46212769	46214234	2	-1.1278
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	22	46215076	47717016	1228	-0.0314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_F01_896564	X	3167107	154558783	63757	8e-04
